Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 HIGD1AP12-201ENST00000427832 281 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AC114973.1-201ENST00000429057 632 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 GTF2IP3-201ENST00000433887 494 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC009220.1-201ENST00000451614 275 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 snoU13.1-201ENST00000459157 104 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC146507.1-201ENST00000468335 354 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AC010301.1-201ENST00000473936 355 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC188H7C350 OR4R3P-201ENST00000525084 838 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC188H7C350 CYCSP29-201ENST00000533731 318 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AC099489.2-201ENST00000574976 260 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 MIR4666A-201ENST00000580160 79 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 OR4G1P-201ENST00000588632 938 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AC025588.3-201ENST00000604182 274 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 AL391262.2-201ENST00000622466 494 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 CEP170P1-201ENST00000502249 4587 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 MTND4P10-201ENST00000446199 1363 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL645568.2-201ENST00000432815 1337 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL355578.1-201ENST00000607405 1328 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 RNU6-1066P-201ENST00000363573 105 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 RNU6-374P-201ENST00000364146 108 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 MIR649-201ENST00000384843 97 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 MIR192-201ENST00000384915 110 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 MIR141-201ENST00000384975 95 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL079342.2-201ENST00000403367 482 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL023807.1-201ENST00000407932 359 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC119751.6-201ENST00000416712 186 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 OSTCP5-201ENST00000425293 453 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 OR5BE1P-201ENST00000425977 939 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 RAC1P8-201ENST00000427086 527 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 MTCO1P53-201ENST00000441633 699 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL590399.6-201ENST00000446396 307 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC041039.1-201ENST00000485656 536 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC104057.1-201ENST00000515547 497 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC188H7C350 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AP001317.1-201ENST00000531194 960 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC092470.1-201ENST00000546187 132 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 MTCYBP23-201ENST00000558717 1102 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC020910.2-201ENST00000603635 610 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AL513477.2-201ENST00000607858 568 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 AC078899.5-201ENST00000612475 178 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC188H7C350 OR5BE1P-202ENST00000641168 1176 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
CCDC188H7C350 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC188H7C350 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC188H7C350 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC188H7C350 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC188H7C350 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC006504.1-201ENST00000562493 3666 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 DCAF13P1-201ENST00000495256 1330 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 RNU5E-10P-201ENST00000363506 118 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 RNA5SP366-201ENST00000365454 123 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 SNORD116-23-201ENST00000384645 92 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms