Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL356276.2-201ENST00000435919 558 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL161747.1-201ENST00000480068 358 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 MTND2P14-201ENST00000482139 351 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL035404.1-201ENST00000497982 568 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC113347.3-201ENST00000509113 148 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 MIR4666A-201ENST00000580160 79 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 EIF1P6-201ENST00000600054 334 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 RNU4-89P-201ENST00000607443 133 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC064801.1-201ENST00000612025 407 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 MIR7151-201ENST00000617477 60 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC109454.4-201ENST00000623411 649 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC026951.1-201ENST00000559530 2459 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC105074.1-201ENST00000623380 3095 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 snoZ40.1-201ENST00000364540 72 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 SNORD116-8-201ENST00000384365 95 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL391219.1-201ENST00000422570 483 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 GSTA7P-201ENST00000438425 448 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 MRPL42P4-201ENST00000453267 443 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC084024.2-201ENST00000503480 791 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC010486.2-201ENST00000505572 483 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AGGF1P6-201ENST00000569213 976 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL121834.1-201ENST00000572284 509 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC010680.3-201ENST00000604215 520 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC067959.1-201ENST00000604334 379 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL450489.1-201ENST00000612071 468 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL592148.2-201ENST00000612210 372 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 MIR7702-201ENST00000621931 59 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 RNA5SP196-201ENST00000625967 102 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 MFSD8-245ENST00000641743 948 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 RLIMP1-201ENST00000339626 1680 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 OR11H5P-202ENST00000641612 1325 ntBASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX9Q9Y5X1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SNX9Q9Y5X1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms