Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 U2.22-201ENST00000636441 106 ntBASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 AL445437.1-201ENST00000623157 3087 ntBASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 MFSD8-219ENST00000641228 2559 ntBASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HRH3Q9Y5N1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
HRH3Q9Y5N1 AL591848.4-201ENST00000567832 3472 ntBASIC6.02□□□□□ -1.44
HRH3Q9Y5N1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC020658.2-201ENST00000559030 4020 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC011455.2-201ENST00000599320 3336 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RNU5E-6P-201ENST00000365574 115 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 SNORA70.9-201ENST00000384370 135 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.496-201ENST00000384444 101 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 DBIP1-201ENST00000401435 260 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RNU2-36P-201ENST00000410361 191 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.594-201ENST00000410373 140 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RN7SKP296-201ENST00000411185 341 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RPL30P2-201ENST00000414021 291 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RPL6P29-201ENST00000414863 865 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 GJA6P-201ENST00000415117 1042 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC114491.1-201ENST00000416095 246 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 EIF4EP1-201ENST00000422311 642 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC083862.1-201ENST00000427378 1242 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RPL23AP50-201ENST00000434149 455 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 OSTCP8-201ENST00000445117 448 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 SNORD121B-201ENST00000458838 81 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RPL12P20-201ENST00000475538 479 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RPL21P93-201ENST00000480465 489 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 VN1R104P-201ENST00000505115 1009 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 SCARNA5-201ENST00000516201 276 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RNU2-53P-201ENST00000516257 147 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC005363.1-201ENST00000530779 351 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC018462.2-201ENST00000605375 395 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AL590099.1-201ENST00000615276 138 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC009120.2-204ENST00000621548 2032 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AL136984.1-201ENST00000607611 1893 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC027575.3-201ENST00000583058 2747 ntBASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HRH3Q9Y5N1 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 ZNF33CP-201ENST00000432492 2030 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 AC010401.2-201ENST00000575137 4934 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.39-201ENST00000362620 98 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 RNA5SP279-201ENST00000365513 117 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 SNORD82-201ENST00000365530 70 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 RHOT1P2-201ENST00000366423 333 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.404-201ENST00000383978 102 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.515-201ENST00000384535 112 ntBASIC6.01□□□□□ -1.45
HRH3Q9Y5N1 RNU6-550P-201ENST00000391057 101 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms