Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL138820.1-201ENST00000617901 5305 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC008758.3-201ENST00000507003 1829 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL161781.1-201ENST00000354277 403 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RNVU1-3-201ENST00000364313 161 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 SNORA56-201ENST00000383966 129 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RNA5SP87-201ENST00000384155 118 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 U8.14-201ENST00000390843 143 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTCYBP36-201ENST00000404146 440 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTCO1P17-201ENST00000411522 491 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL138785.1-201ENST00000425821 331 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTCO3P30-201ENST00000426425 670 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL19P16-201ENST00000433839 588 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND1P28-201ENST00000435623 950 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RPS24P1-201ENST00000438550 371 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND1P27-201ENST00000451117 902 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC022034.3-201ENST00000471393 478 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL136126.1-201ENST00000473603 402 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL7P24-201ENST00000493052 752 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 IGBP1P4-201ENST00000503202 879 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 OR5BC1P-201ENST00000529327 739 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL161713.1-201ENST00000555538 145 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR544B-201ENST00000582372 78 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AL136363.2-201ENST00000604173 851 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AC027807.2-201ENST00000616099 408 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 AP003400.3-201ENST00000624904 346 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND4P26-201ENST00000415971 1359 ntBASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF734P-201ENST00000419494 1534 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 OR11H4-201ENST00000315409 1082 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU6-28P-201ENST00000362378 107 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU6-289P-201ENST00000364093 107 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 DEFB108C-201ENST00000400154 252 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC136624.1-201ENST00000400791 413 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 GJA6P-201ENST00000415117 1042 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 COX6B1P1-201ENST00000415962 213 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 GLRXP1-201ENST00000423261 334 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 EI24P4-201ENST00000423683 1078 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 RPS3AP44-201ENST00000425466 790 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL360081.1-201ENST00000428299 555 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 PSMA2P3-201ENST00000429685 675 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL450263.2-201ENST00000439400 589 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 OR52J1P-201ENST00000450596 932 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 HMGB1P15-201ENST00000453854 435 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 OR6K1P-201ENST00000456766 971 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms