Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TVP23CP2-201ENST00000571473 623 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC104687.2-201ENST00000604442 342 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC080013.4-201ENST00000607624 649 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC092354.2-201ENST00000607786 514 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AL159169.3-201ENST00000608871 561 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AL049794.2-201ENST00000616301 365 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC018755.4-201ENST00000619715 454 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 RNU6-156P-201ENST00000621869 107 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AL031119.1-201ENST00000404707 1879 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 SNORA62-201ENST00000365493 153 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RNU6-1042P-201ENST00000384204 107 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 OR6C69P-201ENST00000394268 893 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 GLULP6-201ENST00000399502 913 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AL121972.1-201ENST00000402023 252 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RN7SKP56-201ENST00000410513 331 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AF274854.1-201ENST00000413236 615 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RPL21P32-201ENST00000419877 477 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC012512.1-201ENST00000446594 718 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC026410.2-201ENST00000460281 156 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RN7SL517P-201ENST00000462240 305 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AP000797.1-201ENST00000478870 387 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 POU5F1P7-201ENST00000508759 541 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC104057.1-201ENST00000515547 497 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RNA5SP43-201ENST00000516559 110 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC091489.2-201ENST00000566263 604 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC141257.3-201ENST00000572906 215 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC083809.1-201ENST00000615051 472 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 AC099842.1-201ENST00000619919 596 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 U6.101-201ENST00000637707 76 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.93□□□□□ -1.62
PCDHB1Q9Y5F3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 SMG1P6-201ENST00000532337 2930 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 OR10J6P-201ENST00000289731 930 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC079741.1-201ENST00000321498 212 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPL32P3-201ENST00000359025 275 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 Y_RNA.359-201ENST00000365498 102 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 SNORA75-201ENST00000384158 137 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 MIR320C1-201ENST00000408566 88 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 OR8G2P-201ENST00000412796 908 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC109780.2-201ENST00000413467 845 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPL7P30-201ENST00000420888 709 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPS27AP7-201ENST00000422792 455 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPL12P34-201ENST00000424532 479 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 COX6CP15-201ENST00000426313 211 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC092162.1-201ENST00000432828 434 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 MTND1P28-201ENST00000435623 950 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPL37P21-201ENST00000435890 276 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AL589765.3-201ENST00000446084 462 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC239367.2-201ENST00000447309 705 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 NPM1P49-201ENST00000448027 714 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 RPL7P22-201ENST00000466005 733 ntBASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB1Q9Y5F3 AC106872.3-201ENST00000495104 446 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms