Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC008083.4-201ENST00000615076 444 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 AC092650.2-201ENST00000619984 902 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 AC007494.3-201ENST00000624660 743 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKP3Q9Y446 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 AL451142.2-201ENST00000429076 2090 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PKP3Q9Y446 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PKP3Q9Y446 AC011477.1-204ENST00000623416 1325 ntBASIC4.45□□□□□ -1.7
PKP3Q9Y446 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
PKP3Q9Y446 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 OR4A15-201ENST00000314706 1035 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 Y_RNA.18-201ENST00000362461 102 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RNA5SP307-201ENST00000362863 116 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 Y_RNA.560-201ENST00000384689 102 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 ATP5F1P4-201ENST00000397288 746 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 USP9YP33-201ENST00000412220 421 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RPS20P14-201ENST00000412545 360 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RPS15AP38-201ENST00000413110 372 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 MORF4L1P6-201ENST00000418771 268 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC245028.1-201ENST00000423259 256 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC019178.2-201ENST00000423595 505 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 AL590103.1-201ENST00000434488 307 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 USP9YP35-201ENST00000435696 412 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RPL12P46-201ENST00000436610 195 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 SLC31A1P1-201ENST00000451221 567 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 MTCO3P16-201ENST00000454456 754 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RN7SL738P-201ENST00000470264 297 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 RN7SL812P-201ENST00000493791 279 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC117532.1-201ENST00000514638 323 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 MIR3915-201ENST00000578518 97 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC115286.1-201ENST00000604298 434 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 MIR7703-201ENST00000620784 77 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC007546.2-201ENST00000623996 360 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC021755.1-201ENST00000559747 1447 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.44□□□□□ -1.7
PKP3Q9Y446 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 OR5BR1P-201ENST00000524992 1330 ntBASIC4.44□□□□□ -1.7
PKP3Q9Y446 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKP3Q9Y446 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP3Q9Y446 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP3Q9Y446 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP3Q9Y446 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP3Q9Y446 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 MIR3065-201ENST00000390137 79 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 RNU2-28P-201ENST00000410457 189 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 RPL21P108-201ENST00000413857 481 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 SNRPFP1-201ENST00000414761 252 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 VDAC1P6-201ENST00000430062 855 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 AL132765.1-201ENST00000434165 553 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP3Q9Y446 MTND2P20-201ENST00000440805 661 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 AC073387.1-201ENST00000453261 709 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 AC053481.1-201ENST00000467217 306 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 AC090013.1-201ENST00000485147 480 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 OR4G11P-201ENST00000492842 939 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 PGBD4P4-201ENST00000509673 613 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP3Q9Y446 AC134698.5-201ENST00000519444 336 ntBASIC4.43□□□□□ -1.7
PKP3Q9Y446 NPM1P6-201ENST00000521088 871 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms