Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC107954.1-201ENST00000565906 727 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC015726.1-201ENST00000602353 681 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC020923.1-201ENST00000624021 917 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO1P18-201ENST00000455518 1419 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 ENSAP3-201ENST00000312710 333 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-543P-201ENST00000362576 108 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC083799.1-201ENST00000366451 910 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC073264.1-201ENST00000411508 416 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 HMGB3P31-201ENST00000413333 595 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC073310.1-201ENST00000423226 1033 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC009263.1-201ENST00000441193 1239 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 MTND5P8-201ENST00000449817 1083 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO3P20-201ENST00000454926 688 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 snoU13.3-201ENST00000459441 104 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC108064.1-201ENST00000513791 460 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 RN7SKP116-201ENST00000516902 319 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC022784.5-201ENST00000522241 437 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL606490.9-201ENST00000603331 271 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 U7.8-201ENST00000619968 63 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC006963.1-201ENST00000624003 1052 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC104820.1-201ENST00000624183 307 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AC068620.4-201ENST00000636730 1182 ntBASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
RHBDD3Q9Y3P4 AL359893.1-201ENST00000447628 1580 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-252P-201ENST00000363232 107 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 HMGB3P18-201ENST00000406327 590 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MTND4P22-201ENST00000413116 1169 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RPS3AP9-201ENST00000417027 792 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RSL24D1P6-201ENST00000426934 401 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 UBE2V1P5-201ENST00000440070 405 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC092754.2-201ENST00000463506 460 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL024509.2-201ENST00000493462 493 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RN7SKP209-201ENST00000516888 304 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RN7SKP289-201ENST00000517244 295 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC022695.1-201ENST00000522089 237 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 PARP1P2-201ENST00000556806 195 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC025918.2-201ENST00000558683 763 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 CYP2C60P-201ENST00000566088 139 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MIR3186-201ENST00000577404 85 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC005229.3-201ENST00000603438 323 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL163642.2-201ENST00000604722 1019 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 VIS1.1-201ENST00000610517 203 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms