Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC106730.3-201ENST00000624568 641 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 MTCO1P6-201ENST00000481192 1384 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RNU6-354P-201ENST00000383862 107 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RNU6-610P-201ENST00000384264 107 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL807761.1-201ENST00000417622 171 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL009174.1-201ENST00000426577 416 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 SNORA71B-202ENST00000439232 272 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 HMGN2P21-201ENST00000447764 270 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RPL12P26-201ENST00000452430 487 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC008379.1-201ENST00000463655 464 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AP000873.1-201ENST00000463987 400 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 OR8L1P-201ENST00000534005 955 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC011611.5-201ENST00000552477 578 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC074029.1-201ENST00000552531 1044 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC017100.2-201ENST00000584628 355 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 HSPE1P14-201ENST00000605812 302 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AP005229.2-201ENST00000609980 697 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 CASC19-261ENST00000641853 1638 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
COPS3Q9UNS2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPS3Q9UNS2 ZNF849P-201ENST00000594711 1566 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AP001148.1-201ENST00000624124 2359 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 MIR525-201ENST00000384978 85 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 OR6C69P-201ENST00000394268 893 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC007390.1-201ENST00000415722 356 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 Z97055.1-201ENST00000419730 712 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC002075.2-201ENST00000425207 252 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 PSMA2P3-201ENST00000429685 675 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AL512637.2-201ENST00000431287 1256 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RPL23AP33-201ENST00000442301 452 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RPL6P5-201ENST00000445678 828 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 NUTF2P3-201ENST00000448540 384 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RPL29P29-201ENST00000448725 423 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 PPIAP3-201ENST00000450588 505 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RPS20P32-201ENST00000456044 356 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RNU7-140P-201ENST00000459546 60 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 CEACAMP10-202ENST00000495431 496 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 PRELID3BP4-201ENST00000515476 571 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 OR4R2P-201ENST00000530815 597 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.38□□□□□ -1.87
COPS3Q9UNS2 NIFKP8-201ENST00000560500 874 ntBASIC3.38□□□□□ -1.87
COPS3Q9UNS2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms