Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 U3.26-201ENST00000391236 204 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 AC005300.1-201ENST00000428401 373 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 RPS26P40-201ENST00000435209 294 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 SNORA71B-202ENST00000439232 272 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 IFNWP4-201ENST00000453148 294 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 AC008280.2-201ENST00000455473 307 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 RPL30P11-201ENST00000495304 339 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 AL049777.1-201ENST00000622740 518 ntBASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC7.15□□□□□ -1.27
SHROOM4Q9ULL8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC005002.1-201ENST00000447458 540 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 RPL21P18-201ENST00000469899 480 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 RN7SL271P-201ENST00000487601 295 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC023825.1-201ENST00000566704 1030 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC006363.1-201ENST00000603806 463 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AC022079.2-201ENST00000619739 566 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 AL590396.4-201ENST00000636779 956 ntBASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM4Q9ULL8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 RNU5B-4P-201ENST00000363508 111 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AL024507.1-201ENST00000412741 274 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 PTP4A1P7-201ENST00000423476 514 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 RNF2P1-201ENST00000442955 1010 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 RPS3AP14-201ENST00000483907 780 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC008427.1-201ENST00000503102 655 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC017037.1-201ENST00000508460 471 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 SNORD116-26-201ENST00000516006 96 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 STX3-204ENST00000530221 534 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 EIF4BP1-201ENST00000554881 351 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC084757.1-201ENST00000559987 490 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 CYP2C60P-201ENST00000566088 139 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 MIR4672-201ENST00000583126 81 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC135507.2-201ENST00000612443 309 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 AC018926.3-201ENST00000618841 406 ntBASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM4Q9ULL8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 RNU6-1000P-201ENST00000391066 106 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AC000041.1-201ENST00000439655 175 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 SETD6P1-201ENST00000444575 317 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 BX248409.1-201ENST00000455497 255 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AP001486.1-201ENST00000463339 476 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 FTH1P24-201ENST00000503502 462 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AC006518.2-201ENST00000542513 940 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AC023824.3-201ENST00000569003 562 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AP000919.1-202ENST00000581139 1264 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 AL049555.1-201ENST00000562834 1933 ntBASIC7.12□□□□□ -1.27
SHROOM4Q9ULL8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AL031121.1-201ENST00000406553 254 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 RN7SKP199-201ENST00000410325 305 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 RNU6-77P-201ENST00000410554 91 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 USP9YP36-201ENST00000424581 829 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 USP9YP31-201ENST00000431405 881 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 HMGB3P21-201ENST00000452483 547 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms