Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC022034.1-201ENST00000512867 2156 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.291-201ENST00000364886 113 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-890P-201ENST00000384121 107 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-328P-201ENST00000390887 106 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL023284.3-201ENST00000407767 334 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RNU2-29P-201ENST00000410423 189 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RPL12P34-201ENST00000424532 479 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC083862.1-201ENST00000427378 1242 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 OR2AS1P-201ENST00000427827 319 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 CYCSP12-201ENST00000437729 300 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 POU5F1P5-201ENST00000445059 658 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-1132P-201ENST00000459214 107 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC092824.1-201ENST00000483524 576 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RN7SL362P-201ENST00000494228 267 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC022206.1-201ENST00000495947 347 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.654-201ENST00000497848 106 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-182P-201ENST00000516970 105 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC002310.3-201ENST00000569728 723 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC012368.3-201ENST00000604190 219 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 HSPE1P14-201ENST00000605812 302 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL591167.1-201ENST00000607321 456 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL391813.2-201ENST00000609113 322 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC091903.1-201ENST00000624322 454 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 MIR4302-201ENST00000638058 60 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 SMG1P6-201ENST00000532337 2930 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 STX3-208ENST00000641815 3236 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AP002370.1-201ENST00000528055 1602 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 TTC41P-205ENST00000551270 3963 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 SNORD3E-201ENST00000362899 217 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.167-201ENST00000363735 109 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-853P-201ENST00000364306 107 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNA5SP512-201ENST00000364550 120 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNY4P16-201ENST00000364768 94 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.380-201ENST00000365663 111 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-101P-201ENST00000410323 104 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 MRPS21P5-201ENST00000417885 231 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 OR4K11P-201ENST00000431829 904 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RPS20P1-201ENST00000434853 354 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC104332.1-201ENST00000440471 797 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC002381.1-201ENST00000447049 280 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-1023P-201ENST00000516137 106 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-256P-201ENST00000516747 97 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 RN7SKP99-201ENST00000517028 307 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC012400.1-201ENST00000518452 381 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AL133399.1-201ENST00000527476 298 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 HAUS8P1-201ENST00000549005 542 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 NPM1P42-201ENST00000560329 862 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 SULT1C2P1-202ENST00000562418 459 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 MIR4504-201ENST00000577413 92 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 OR4K8P-201ENST00000578842 1048 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms