Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC127024.5-201ENST00000580085 462 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC078795.3-201ENST00000602913 472 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC069304.2-201ENST00000605154 435 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC087045.1-201ENST00000605856 382 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC008536.2-201ENST00000607284 349 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC108479.2-201ENST00000617314 601 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC018926.3-201ENST00000618841 406 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC136475.10-201ENST00000620253 385 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC009229.4-201ENST00000623854 1947 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 GDI2P1-201ENST00000429312 1336 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SAMMSON-226ENST00000642089 1582 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RNF6P1-201ENST00000444889 1784 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AP001029.2-203ENST00000589795 4910 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RNA5SP223-201ENST00000365174 120 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 GSTA9P-201ENST00000406231 611 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL390316.1-201ENST00000406279 553 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RPL6P29-201ENST00000414863 865 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC009302.1-201ENST00000417147 390 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL953862.1-201ENST00000423016 168 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 CHIAP3-201ENST00000423668 1133 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL136231.1-201ENST00000429407 730 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC093414.1-201ENST00000434712 514 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL451074.3-201ENST00000437709 472 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 FDX1P2-201ENST00000450769 375 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 IGHV5-78-201ENST00000450948 295 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RPL26P28-201ENST00000451325 435 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 PRPF38AP1-201ENST00000451976 933 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 NUTF2P7-201ENST00000453086 375 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC010326.1-201ENST00000462726 602 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RN7SL441P-201ENST00000492388 296 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC079382.1-201ENST00000493346 557 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC114981.1-201ENST00000503897 678 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC009646.1-201ENST00000510455 318 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RN7SKP21-201ENST00000516503 220 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RN7SKP92-201ENST00000517266 244 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 DEFB131D-201ENST00000526803 184 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AK6P1-201ENST00000540219 478 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AP005119.2-201ENST00000579735 1105 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC025449.1-201ENST00000603896 529 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 PRELID3BP8-201ENST00000604148 295 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC010200.2-201ENST00000605098 235 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL590282.1-201ENST00000610379 1136 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AL031658.2-201ENST00000616850 651 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AP001005.3-201ENST00000622049 129 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC091046.3-201ENST00000631455 1574 ntBASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM7Q9NR12 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AL360270.2-201ENST00000562952 5985 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 RNU6-116P-201ENST00000384042 109 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms