Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 RPS20P2-201ENST00000402520 389 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 MRPL42P2-201ENST00000403169 426 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL356421.1-201ENST00000403255 413 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 GSTA9P-201ENST00000406231 611 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 Y_RNA.604-201ENST00000410574 102 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL590233.1-201ENST00000430017 456 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RPEP2-201ENST00000432149 701 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL356276.2-201ENST00000435919 558 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 CNOT7P2-201ENST00000441051 832 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AL353572.1-201ENST00000442490 417 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 MTATP6P30-201ENST00000443540 664 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RPL17P49-201ENST00000443728 411 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 NOP56P2-201ENST00000447491 769 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC104634.1-201ENST00000452720 462 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC022133.1-201ENST00000490961 571 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RPS24P16-201ENST00000497294 392 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 IGBP1P4-201ENST00000503202 879 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 KCTD9P5-201ENST00000504141 1170 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 HIGD1AP14-201ENST00000507617 282 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 RNA5SP92-201ENST00000516437 110 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC124947.2-202ENST00000552735 133 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 CENPUP2-201ENST00000555897 1186 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC090527.3-201ENST00000619041 548 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC136475.10-201ENST00000620253 385 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC124864.2-201ENST00000624736 186 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC010149.2-201ENST00000637608 315 ntBASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM39Q9HCM9 AC004520.1-201ENST00000608362 1413 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 GNG5P1-201ENST00000255500 204 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 FRG1BP-201ENST00000278882 761 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 U3.2-201ENST00000362981 210 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 RNU6-343P-201ENST00000364709 104 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 RNU1-43P-201ENST00000365052 165 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC005522.1-201ENST00000395416 346 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC233728.2-201ENST00000425348 757 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL139148.1-201ENST00000427122 680 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC008065.1-201ENST00000428525 348 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 TIMM9P3-201ENST00000428659 274 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL596276.1-201ENST00000434465 418 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 CLUHP1-201ENST00000435012 1190 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 MTND4LP10-201ENST00000435146 291 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC009961.2-201ENST00000435771 251 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 FGF7P6-202ENST00000451282 293 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AP1S2P1-201ENST00000457344 379 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 MYL12BP2-201ENST00000503948 512 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC006390.1-201ENST00000508068 283 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC108078.1-201ENST00000508073 725 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC093677.1-201ENST00000514414 678 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 Y_RNA.672-201ENST00000516289 104 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 RNU6-201P-201ENST00000517100 61 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL390334.1-201ENST00000556395 450 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 SNORA59B-202ENST00000578183 701 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AC245014.2-201ENST00000603689 287 ntBASIC5.23□□□□□ -1.57
TRIM39Q9HCM9 AL162431.4-201ENST00000604674 411 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms