Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL360157.1-201ENST00000565962 87 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC093519.1-201ENST00000566109 298 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX3Q99909 AC008782.1-201ENST00000603386 430 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC020910.2-201ENST00000603635 610 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AL356218.2-201ENST00000605264 187 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 PART1_2.1-201ENST00000612397 250 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC123767.1-202ENST00000620407 817 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AL512506.2-201ENST00000624472 458 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 MFSD8-245ENST00000641743 948 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 DBF4P1-201ENST00000412976 1892 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC135352.1-201ENST00000506173 1418 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 RAD17P1-201ENST00000418130 2042 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX3Q99909 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX3Q99909 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 RNVU1-3-201ENST00000364313 161 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 RNU6-707P-201ENST00000364647 95 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 RNU6-921P-201ENST00000384361 107 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 MIR217-201ENST00000384817 110 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 U3.22-201ENST00000391120 215 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 VN1R8P-201ENST00000407739 893 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 CRYBB2P1-203ENST00000415709 538 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC092647.1-201ENST00000420654 287 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 RAC1P8-201ENST00000427086 527 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 MTCO1P3-201ENST00000429327 192 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC092393.1-201ENST00000439625 742 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AL358794.1-201ENST00000445689 381 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 TPT1P12-201ENST00000448968 492 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 RPL21P126-201ENST00000470049 478 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 RN7SL860P-201ENST00000473738 223 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 RPL7P47-201ENST00000497299 556 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 UBE2CP3-201ENST00000502715 450 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 RNA5SP446-201ENST00000515955 82 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.67□□□□□ -1.82
SSX3Q99909 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX3Q99909 ZNF192P1-203ENST00000565888 810 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 MIR3690-201ENST00000580266 75 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC091057.3-201ENST00000602684 733 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC008966.2-201ENST00000606157 453 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AL513477.2-201ENST00000607858 568 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 AC009237.15-201ENST00000610252 501 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 AC006213.4-201ENST00000616184 634 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX3Q99909 AL157770.1-201ENST00000623049 439 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX3Q99909 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SSX3Q99909 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.67□□□□□ -1.82
SSX3Q99909 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX3Q99909 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSX3Q99909 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
SSX3Q99909 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX3Q99909 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX3Q99909 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 MIR649-201ENST00000384843 97 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 ZNF602P-201ENST00000405929 924 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 RAB28P1-201ENST00000411517 641 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 FCF1P2-201ENST00000415284 583 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 RPL7AP25-201ENST00000423357 805 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms