Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL592148.1-201ENST00000413568 445 ntBASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 AC245517.2-201ENST00000442890 346 ntBASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP2Q96SN8 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC019155.1-201ENST00000382242 574 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 U3.42-201ENST00000408746 214 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 RANP7-201ENST00000418085 644 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC093156.1-201ENST00000440382 670 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 PRELID3BP6-201ENST00000503839 571 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 ELL2P4-201ENST00000446870 1376 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC095050.2-201ENST00000510748 1458 ntBASIC3.66□□□□□ -1.82
CDK5RAP2Q96SN8 AC093719.1-202ENST00000392735 373 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 COTL1P1-201ENST00000422309 375 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 RPL12P46-201ENST00000436610 195 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AC112653.1-201ENST00000443851 386 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 IGHV3-29-201ENST00000604817 344 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 BMS1P21-201ENST00000634565 365 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 MIR622-201ENST00000638396 96 ntBASIC3.65□□□□□ -1.82
CDK5RAP2Q96SN8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP2Q96SN8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP2Q96SN8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP2Q96SN8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP2Q96SN8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL031679.1-201ENST00000400616 525 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL353692.2-201ENST00000407054 335 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL034379.1-201ENST00000423216 253 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC008065.1-201ENST00000428525 348 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 HMGB3P11-201ENST00000440127 604 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 HMGB3P8-201ENST00000449709 577 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 MIR2276-201ENST00000516886 89 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC010306.1-201ENST00000523223 1117 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 HMGB3P26-201ENST00000560051 582 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL109741.3-201ENST00000561748 592 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 MIR4644-201ENST00000579929 84 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC009948.4-201ENST00000604692 675 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 NR1H5P-201ENST00000452683 1377 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 RNU6-984P-201ENST00000363236 109 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC106901.1-201ENST00000425086 698 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 CCRL1P1-201ENST00000449542 1053 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 PRELID3BP8-201ENST00000604148 295 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 AC073476.4-201ENST00000628409 72 ntBASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP2Q96SN8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 NACA3P-201ENST00000359690 648 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AL138885.1-201ENST00000405921 675 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 RPS24P13-201ENST00000442520 397 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AC099063.2-201ENST00000446360 662 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 HMGN1P18-201ENST00000457642 277 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 OR2A20P-203ENST00000498397 1268 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 AL451007.1-201ENST00000595491 289 ntBASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP2Q96SN8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms