Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IFT140Q96RY7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 AL513174.1-201ENST00000423182 629 ntBASIC5.06□□□□□ -1.6
IFT140Q96RY7 SNORD109B-201ENST00000458961 67 ntBASIC5.06□□□□□ -1.6
IFT140Q96RY7 SNORD109A-201ENST00000459128 67 ntBASIC5.06□□□□□ -1.6
IFT140Q96RY7 AC010469.1-201ENST00000463864 576 ntBASIC5.06□□□□□ -1.6
IFT140Q96RY7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 AL049874.4-201ENST00000557593 255 ntBASIC5.06□□□□□ -1.6
IFT140Q96RY7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
IFT140Q96RY7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT140Q96RY7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT140Q96RY7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 AL360182.1-201ENST00000397433 468 ntBASIC5.05□□□□□ -1.6
IFT140Q96RY7 RNA5SP39-201ENST00000411245 120 ntBASIC5.05□□□□□ -1.6
IFT140Q96RY7 AL160275.2-201ENST00000412010 394 ntBASIC5.05□□□□□ -1.6
IFT140Q96RY7 MRPL50P2-201ENST00000416821 482 ntBASIC5.05□□□□□ -1.6
IFT140Q96RY7 AC087499.2-201ENST00000432861 149 ntBASIC5.05□□□□□ -1.6
IFT140Q96RY7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT140Q96RY7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
IFT140Q96RY7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
IFT140Q96RY7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
IFT140Q96RY7 AC087190.4-201ENST00000574616 8334 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 MIR504-201ENST00000385065 83 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 AL121834.1-202ENST00000404494 277 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 TOMM20P4-201ENST00000427861 435 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 AP002884.2-201ENST00000471647 395 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 METTL15P1-201ENST00000481421 1045 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 AL353684.1-201ENST00000622677 1120 ntBASIC5.04□□□□□ -1.6
IFT140Q96RY7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
IFT140Q96RY7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
IFT140Q96RY7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC000123.3-201ENST00000624029 4975 ntBASIC5.03□□□□□ -1.6
IFT140Q96RY7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IFT140Q96RY7 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC234778.2-201ENST00000566241 354 ntBASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC026790.2-201ENST00000606282 430 ntBASIC5.03□□□□□ -1.6
IFT140Q96RY7 OR6R2P-201ENST00000609216 300 ntBASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.03□□□□□ -1.6
IFT140Q96RY7 AC046144.1-201ENST00000478559 1853 ntBASIC5.03□□□□□ -1.6
IFT140Q96RY7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.02□□□□□ -1.61
IFT140Q96RY7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
IFT140Q96RY7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 RPS17P11-201ENST00000474297 293 ntBASIC5.02□□□□□ -1.61
IFT140Q96RY7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 AP002812.4-201ENST00000532139 286 ntBASIC5.02□□□□□ -1.61
IFT140Q96RY7 AC009237.17-201ENST00000618111 748 ntBASIC5.02□□□□□ -1.61
IFT140Q96RY7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
IFT140Q96RY7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
IFT140Q96RY7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
IFT140Q96RY7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
IFT140Q96RY7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
IFT140Q96RY7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
IFT140Q96RY7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
IFT140Q96RY7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
IFT140Q96RY7 RNU6-859P-201ENST00000362728 107 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 CST9LP2-201ENST00000437612 320 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 AC112653.1-201ENST00000443851 386 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 snoU13.26-201ENST00000459452 105 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 AC008549.1-201ENST00000512900 643 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 RNA5SP24-201ENST00000516478 95 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 MIR5047-201ENST00000579212 100 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 OR1AB1P-201ENST00000585564 761 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 AL451049.1-201ENST00000608672 497 ntBASIC5.01□□□□□ -1.61
IFT140Q96RY7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
IFT140Q96RY7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.01□□□□□ -1.61
IFT140Q96RY7 MIR448-201ENST00000362131 111 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 RNU2-52P-201ENST00000410680 190 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5□□□□□ -1.61
IFT140Q96RY7 NECAP1P2-201ENST00000455668 727 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 RN7SL93P-201ENST00000463035 293 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms