Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC011492.1-201ENST00000600023 315 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC005972.3-201ENST00000606304 481 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC006133.1-201ENST00000617106 264 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 MIR6864-201ENST00000617935 70 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AL356863.1-201ENST00000623378 1080 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 SNORA62.3-201ENST00000365110 153 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 U3.15-201ENST00000365398 212 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 RNA5SP235-201ENST00000365411 114 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 RNU6-98P-201ENST00000384173 107 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 MIR142-201ENST00000384835 87 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 RPL7P60-201ENST00000397636 735 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 MTHFD2P2-201ENST00000407725 247 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 UBE2V1P11-201ENST00000411559 285 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 VTA1P1-201ENST00000414044 866 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC008065.1-201ENST00000428525 348 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 ARL4AP4-201ENST00000434170 518 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 TPTE2P6-202ENST00000445572 1007 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 RPL6P9-201ENST00000466502 859 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 RN7SL542P-201ENST00000467147 294 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 FCF1P3-201ENST00000496394 590 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 MTATP6P22-201ENST00000507369 598 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC007991.1-201ENST00000522680 631 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC090751.1-201ENST00000566966 267 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 AP003117.1-201ENST00000602771 554 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC024220.1-201ENST00000603675 484 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 RNA5SP108-201ENST00000605921 117 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AP003117.2-201ENST00000606010 545 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AL732618.1-201ENST00000623251 301 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AC090617.9-201ENST00000623751 147 ntBASIC3.38□□□□□ -1.87
COL21A1Q96P44 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL21A1Q96P44 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.38□□□□□ -1.87
COL21A1Q96P44 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 RNU2-6P-201ENST00000411404 190 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 MRPS18BP2-201ENST00000434310 759 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 RPL23AP83-201ENST00000434984 473 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC074367.1-201ENST00000438685 1125 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 TXNP1-201ENST00000441872 371 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 VN1R34P-201ENST00000447387 883 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL358232.1-201ENST00000448030 501 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 CEACAMP4-201ENST00000457676 421 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 RPL7P15-201ENST00000461190 712 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC087312.1-201ENST00000471411 480 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 HMGB3P14-201ENST00000494195 599 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms