Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORA67.7-201ENST00000516664 135 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 RN7SKP234-201ENST00000517173 224 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 GTF2IP22-201ENST00000554443 182 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 ZNF192P1-203ENST00000565888 810 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 MIR3186-201ENST00000577404 85 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC112503.1-201ENST00000608436 391 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AL118508.4-201ENST00000624142 1176 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC083865.1-201ENST00000636634 831 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC119674.1-207ENST00000641355 633 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 GABPAP-201ENST00000419271 1356 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 RNU6-1005P-201ENST00000384519 107 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 ATP5F1P3-201ENST00000397213 657 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 HSPE1P8-201ENST00000406997 288 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC009263.1-201ENST00000441193 1239 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 RPS27P5-201ENST00000444247 244 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC010655.1-201ENST00000449336 292 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 RN7SKP18-201ENST00000516005 275 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 PDCL2P2-201ENST00000533651 189 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC092747.2-201ENST00000545069 983 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 TRAV15-201ENST00000556680 249 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AL034408.1-202ENST00000636088 415 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 MIR4278-201ENST00000636094 69 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AL592494.2-201ENST00000425455 1548 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 PRO1804-201ENST00000623780 2050 ntBASIC3.78□□□□□ -1.8
RPRD1AQ96P16 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.78□□□□□ -1.8
RPRD1AQ96P16 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RPRD1AQ96P16 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RPRD1AQ96P16 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 SNORA31-201ENST00000362607 130 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 ATP5A1P2-201ENST00000412323 255 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 PNRC2P1-201ENST00000423940 420 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC005189.1-201ENST00000431286 310 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 USP9YP31-201ENST00000431405 881 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 ARL4AP4-201ENST00000434170 518 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AL645931.1-201ENST00000439737 410 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 MTCO3P43-201ENST00000440974 771 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 HMGB1P48-201ENST00000446155 598 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC068135.1-201ENST00000446164 246 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AP002812.1-201ENST00000495378 474 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC078918.1-201ENST00000498515 228 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC104619.4-201ENST00000510773 249 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 RNU2-58P-201ENST00000516403 183 ntBASIC3.77□□□□□ -1.81
RPRD1AQ96P16 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.77□□□□□ -1.81
RPRD1AQ96P16 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms