Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AP000563.1-201ENST00000490865 758 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 MIR3944-201ENST00000581277 108 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC244100.1-202ENST00000621554 382 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC004777.1-201ENST00000624317 287 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 MIR153-1-201ENST00000384914 90 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 CFTRP1-201ENST00000456646 183 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 RPL37P6-202ENST00000464216 403 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 TMED11P-201ENST00000479478 690 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC104687.1-201ENST00000485829 412 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC025459.1-201ENST00000504072 156 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC104619.4-201ENST00000510773 249 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 RN7SKP18-201ENST00000516005 275 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 CCNG2P1-201ENST00000549521 1000 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 POLR2KP1-201ENST00000553226 168 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC007687.1-201ENST00000602704 304 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC113194.1-201ENST00000606037 500 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 AC243756.2-201ENST00000618406 463 ntBASIC3.6□□□□□ -1.83
C9orf72Q96LT7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf72Q96LT7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 SNORA27.3-201ENST00000364937 134 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 HNRNPDP2-201ENST00000406475 478 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 RPS3AP25-201ENST00000411660 793 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC017079.2-201ENST00000416102 485 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC023347.2-201ENST00000433994 462 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AL138799.3-201ENST00000438968 350 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 ARL5AP2-201ENST00000444698 533 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 snoU13.22-201ENST00000459428 104 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 RN7SL330P-201ENST00000469709 307 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC078785.3-201ENST00000476607 425 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 RPL21P103-201ENST00000479921 488 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC092451.1-201ENST00000480211 153 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC106707.2-201ENST00000484182 374 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 MTCO1P30-201ENST00000515244 580 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 DUXAP2-201ENST00000519198 589 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AP000926.4-201ENST00000527351 454 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AP000619.3-201ENST00000535634 1127 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 LLPHP1-201ENST00000603571 367 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 SUMO2P14-201ENST00000604488 293 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC069200.1-201ENST00000609511 323 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC019176.2-201ENST00000611579 315 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
C9orf72Q96LT7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf72Q96LT7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
C9orf72Q96LT7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms