Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC104333.2-201ENST00000422630 192 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 USP9YP35-201ENST00000435696 412 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC114755.5-201ENST00000447760 831 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 RPL26P28-201ENST00000451325 435 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 MTCO3P11-201ENST00000455103 774 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 RNA5SP103-201ENST00000459503 118 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 UQCRHP4-201ENST00000471686 272 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 MTCYBP17-201ENST00000503579 789 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 PARP4P3-201ENST00000510265 317 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC022790.1-201ENST00000522872 204 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 ZNF705CP-201ENST00000530515 889 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 CYCSP40-201ENST00000575927 294 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 PIGPP4-201ENST00000584447 307 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC080013.6-201ENST00000606185 215 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 ELL2P4-201ENST00000446870 1376 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 LINC00561-201ENST00000565815 2738 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 SNORA37-201ENST00000384504 129 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 EIF4A1P3-201ENST00000411521 244 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 MTCYBP38-201ENST00000417160 1123 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 OR4F13P-201ENST00000428478 931 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC092427.1-201ENST00000439177 601 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 CDC27P1-201ENST00000445384 715 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC097262.1-201ENST00000452559 548 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 ISCUP1-201ENST00000454451 448 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC092757.1-201ENST00000467293 467 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 MTND3P7-201ENST00000474435 343 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 RPL30P6-201ENST00000475925 342 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 HMGB1P21-201ENST00000502313 581 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC104685.1-201ENST00000502445 371 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC108078.3-201ENST00000502633 489 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC104057.1-201ENST00000515547 497 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 RN7SKP82-201ENST00000516786 223 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 LSM6P2-201ENST00000552208 177 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 RN7SL176P-201ENST00000580352 264 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 VN1R92P-201ENST00000598511 928 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AL163642.2-201ENST00000604722 1019 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC010738.1-201ENST00000604970 987 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC006065.6-201ENST00000625201 545 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.55□□□□□ -1.68
HMGB4Q8WW32 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGB4Q8WW32 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AP001642.1-201ENST00000624727 2117 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 RNU1-130P-201ENST00000363930 160 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 RNU6-1226P-201ENST00000384317 107 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 CYCSP45-201ENST00000402289 315 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL512430.2-201ENST00000406786 339 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms