Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RLIMP1-201ENST00000339626 1680 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNU1-64P-201ENST00000365443 163 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 MIR134-201ENST00000385258 73 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL445189.1-201ENST00000405722 338 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL512430.2-201ENST00000406786 339 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNA5SP104-201ENST00000410989 118 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 HSPE1P12-201ENST00000412576 301 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 DPRXP1-201ENST00000426312 460 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 PPIAP17-201ENST00000438507 471 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RPL7P59-201ENST00000447700 943 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC011352.3-201ENST00000505162 593 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC048346.1-201ENST00000510247 144 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC093755.1-201ENST00000512950 1023 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNA5SP154-201ENST00000516193 111 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AP001317.1-201ENST00000531194 960 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC069240.1-201ENST00000548774 375 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC022662.1-201ENST00000580252 331 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 MIR5684-201ENST00000585074 65 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC022916.3-201ENST00000592961 742 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AP003973.1-201ENST00000604639 691 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AP000255.1-201ENST00000610276 676 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 TUSC7.1-201ENST00000610969 165 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC116447.1-201ENST00000613153 453 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AP000484.1-201ENST00000620067 1252 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 AL049737.1-201ENST00000413920 1403 ntBASIC4.43□□□□□ -1.7
BEST2Q8NFU1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST2Q8NFU1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 OR52B1P-201ENST00000316506 909 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 Y_RNA.465-201ENST00000384293 102 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RNU6-83P-201ENST00000384568 112 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 SNORD65.1-201ENST00000390889 71 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL36AP36-201ENST00000418616 301 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 OR5BE1P-201ENST00000425977 939 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPS26P47-201ENST00000427219 348 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 MTCO1P54-201ENST00000430139 712 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL7P34-201ENST00000433316 712 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 COX7BP2-201ENST00000437976 242 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC093155.1-201ENST00000440164 826 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL23AP76-201ENST00000441860 458 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RAB11AP1-201ENST00000442978 646 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPS4XP4-201ENST00000443195 763 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL359073.1-201ENST00000448036 403 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL162151.2-201ENST00000448875 158 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL23AP15-201ENST00000450202 459 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC004263.1-201ENST00000479327 332 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 FABP5P12-201ENST00000515543 389 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC145350.1-201ENST00000567426 208 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL23AP87-202ENST00000573039 466 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC025627.2-201ENST00000576220 160 ntBASIC4.42□□□□□ -1.7
BEST2Q8NFU1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST2Q8NFU1 AC090246.1-201ENST00000616499 426 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms