Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC009965.2-201ENST00000425328 970 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 NPM1P24-201ENST00000428039 894 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AL117339.2-201ENST00000430475 180 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 COX6CP2-201ENST00000444980 225 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ELOCP30-201ENST00000447108 299 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 RPL36AP33-201ENST00000450395 310 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 HMGN3P1-201ENST00000453847 193 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC008758.3-201ENST00000507003 1829 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 RNU6-202P-201ENST00000515998 96 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 RN7SKP96-201ENST00000516948 297 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AP000873.5-201ENST00000533906 236 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ROCK1P1-201ENST00000573767 549 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC008759.1-201ENST00000589783 983 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC068790.6-201ENST00000602558 258 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 MTCYBP22-201ENST00000603788 447 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC092354.1-201ENST00000606057 376 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AP000254.1-201ENST00000609934 520 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 MIR7844-201ENST00000616161 122 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AC120349.2-201ENST00000625002 298 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 U3.53-201ENST00000628922 216 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 SMG1P4-204ENST00000523028 4131 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL079305.1-201ENST00000623159 3008 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC104623.2-202ENST00000623477 4002 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 MIR383-201ENST00000362257 73 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 Y_RNA.553-201ENST00000384670 102 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 MIR7-3-201ENST00000384898 110 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 RNU1-82P-201ENST00000390851 165 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 NCSTNP1-201ENST00000406229 144 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 MTCO3P41-201ENST00000414801 328 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL645608.4-201ENST00000423619 154 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL450023.3-201ENST00000440592 271 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 H2AFZP5-201ENST00000446960 382 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 BX842559.2-201ENST00000451418 605 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 RPS15AP1-201ENST00000457423 391 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC112206.1-201ENST00000468416 477 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC116337.2-201ENST00000477662 156 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC109486.1-201ENST00000486833 374 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL049874.2-201ENST00000492636 288 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC146944.2-203ENST00000502493 354 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 NIFKP7-201ENST00000503365 834 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 KLRA1P-201ENST00000503499 986 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC139495.1-202ENST00000513164 354 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 MTCO2P32-201ENST00000514865 403 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 RPS27AP18-201ENST00000515536 459 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 RNY4P37-201ENST00000516225 96 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 ARL2BPP5-201ENST00000523141 481 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AP000827.1-201ENST00000527814 258 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC105129.1-201ENST00000560250 297 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC018816.2-201ENST00000621460 353 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 AC112484.5-201ENST00000624189 228 ntBASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms