Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC105402.2-201ENST00000438503 358 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 NPM1P49-201ENST00000448027 714 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 RPL12P26-201ENST00000452430 487 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 FABP5P6-201ENST00000510588 409 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 RN7SKP234-201ENST00000517173 224 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AL389895.1-201ENST00000554127 252 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AL049870.4-201ENST00000555741 486 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC011468.4-201ENST00000603942 409 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AC119674.1-220ENST00000641502 1048 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC021755.1-201ENST00000559747 1447 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AL359837.1-201ENST00000381357 287 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AP002088.1-201ENST00000382740 395 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 SNORA70E-201ENST00000384492 135 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 SNORA48.7-201ENST00000391302 135 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 RN7SKP159-201ENST00000410657 292 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 RANP4-201ENST00000413361 655 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC017079.2-201ENST00000416102 485 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 RPL36AP36-201ENST00000418616 301 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC006539.3-201ENST00000454258 129 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 RPL37P6-202ENST00000464216 403 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AP000893.1-201ENST00000474462 794 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 ACTR3P3-201ENST00000480448 893 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 MTND4LP31-201ENST00000514859 294 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 HMGB1P23-201ENST00000518743 568 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC011602.1-201ENST00000546484 331 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 MIR548Y-201ENST00000582739 110 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC022146.1-201ENST00000595307 847 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC090425.2-201ENST00000608818 501 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC022079.2-201ENST00000619739 566 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 PLCE1P1-201ENST00000622094 305 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AC034229.5-201ENST00000624258 185 ntBASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL3Q8IVW4 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 RNU1-85P-201ENST00000364127 164 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 RSL24D1P1-201ENST00000404972 493 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 CYCSP19-201ENST00000411715 316 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 XKRYP4-201ENST00000414395 483 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 MTCO1P43-201ENST00000431831 488 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AL035246.1-201ENST00000433554 1255 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 XKRYP5-201ENST00000449659 483 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 MTND2P8-201ENST00000450555 1025 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC146507.1-201ENST00000468335 354 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 CYCSP20-201ENST00000473154 315 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 RPL21P129-201ENST00000491732 478 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC005726.1-201ENST00000494679 427 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC010285.3-201ENST00000511668 676 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms