Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTCO2P4-201ENST00000517968 247 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC009117.1-201ENST00000563948 554 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC093249.4-201ENST00000564755 259 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 CYCSP40-201ENST00000575927 294 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 MIR3913-1-201ENST00000577744 102 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 MIR4436B2-201ENST00000581415 91 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 MIR4436B1-201ENST00000583272 91 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC092650.2-201ENST00000619984 902 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC119674.1-212ENST00000641155 993 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC021242.1-201ENST00000507315 2035 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 SAMMSON-213ENST00000641336 1521 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 SNORA74A-201ENST00000364089 198 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 U3.30-201ENST00000391308 210 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 CALM2P3-201ENST00000400429 449 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 RNU2-65P-201ENST00000410162 185 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 NPM1P22-201ENST00000427761 952 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 OR2B7P-201ENST00000429302 934 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 VDAC1P6-201ENST00000430062 855 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 MTND5P14-201ENST00000441481 1267 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 RPL31P44-201ENST00000447680 377 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AURKAPS2-201ENST00000454983 333 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 OR52A4P-201ENST00000472867 958 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 RPS29P25-201ENST00000481709 171 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC011352.3-201ENST00000505162 593 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 RNA5SP135-201ENST00000517019 125 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AP000676.2-201ENST00000529711 301 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 EIF4A2P5-201ENST00000529914 499 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 MTCO3P13-201ENST00000577757 781 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 SNORA74C-1-201ENST00000580726 201 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 MIR3936-201ENST00000584304 110 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC060780.3-201ENST00000589464 80 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC005261.5-201ENST00000596280 355 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC103792.1-201ENST00000603591 919 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL139286.1-201ENST00000604465 483 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC015914.2-201ENST00000618167 288 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 AL139089.1-201ENST00000620372 975 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 MIR6863-201ENST00000636112 90 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 CRYM-AS1-204ENST00000637983 556 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 MKKS-204ENST00000639674 192 ntBASIC4.74□□□□□ -1.65
VRK3Q8IV63 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK3Q8IV63 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK3Q8IV63 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 CCT8P1-201ENST00000413611 1657 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms