Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 MIR7111-201ENST00000619751 72 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC139713.2-215ENST00000641428 5037 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 RNA5SP293-201ENST00000410527 113 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AL356968.1-201ENST00000416622 474 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 GLRXP1-201ENST00000423261 334 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC096947.1-201ENST00000603233 470 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC006840.1-201ENST00000623069 542 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC099506.2-201ENST00000623074 221 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL031985.3-201ENST00000565390 2449 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL138820.1-201ENST00000617901 5305 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 ZNF826P-207ENST00000622273 1910 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC090525.1-201ENST00000479116 478 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL049780.3-201ENST00000624612 1583 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 OR1S2-201ENST00000302592 978 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RNU6-304P-201ENST00000364855 107 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL356057.3-201ENST00000402607 340 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 LAP3P1-201ENST00000403648 294 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC003685.2-201ENST00000422795 395 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RNU6-991P-201ENST00000516168 107 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 MIR9-1-201ENST00000385198 89 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RANP4-201ENST00000413361 655 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AL590103.1-201ENST00000434488 307 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 RN7SL371P-201ENST00000578099 267 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC015871.2-201ENST00000603605 948 ntBASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS13DQ5THJ4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 HMGB3P18-201ENST00000406327 590 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 RPL21P40-201ENST00000428586 483 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 RPL23AP22-201ENST00000437556 453 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AL162389.1-201ENST00000449233 177 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AP000859.1-201ENST00000525536 307 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 Z82195.1-201ENST00000604558 398 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms