Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 RN7SKP283-201ENST00000517197 270 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC009643.1-201ENST00000532030 391 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 RN7SL366P-201ENST00000577957 292 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AL008718.3-201ENST00000610217 321 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC004241.2-201ENST00000614562 444 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC130448.2-201ENST00000624082 374 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 Z99571.1-201ENST00000636677 394 ntBASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARS2Q5ST30 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARS2Q5ST30 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VARS2Q5ST30 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
VARS2Q5ST30 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 ZNF33CP-201ENST00000432492 2030 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC104162.1-201ENST00000430831 2382 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC107980.1-201ENST00000558671 3355 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 Y_RNA.71-201ENST00000362892 104 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 RNU1-55P-201ENST00000365510 158 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 SNORA69.1-201ENST00000390904 137 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 MTATP6P4-201ENST00000427725 675 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 CALM2P2-201ENST00000428512 440 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC234771.2-201ENST00000445718 597 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 DEFA11P-201ENST00000446470 261 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 RPL30P1-201ENST00000488676 339 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AL390198.2-201ENST00000510553 222 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC006427.1-201ENST00000514359 712 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AL121576.1-201ENST00000556055 276 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 TUG1_4.1-201ENST00000619464 181 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 TRIM51GP-201ENST00000534741 1350 ntBASIC7.18□□□□□ -1.26
VARS2Q5ST30 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.18□□□□□ -1.26
VARS2Q5ST30 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARS2Q5ST30 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC138907.8-201ENST00000623981 2256 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 Y_RNA.27-201ENST00000362540 103 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 RNY4P18-201ENST00000391107 89 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AL357075.1-201ENST00000404107 726 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 Y_RNA.592-201ENST00000410274 109 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 DPPA2P3-201ENST00000411853 655 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 EI24P1-201ENST00000416584 867 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 IGKV1OR9-2-201ENST00000431378 277 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 RPL37P1-201ENST00000432310 284 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms