Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC27Q2M243 AL359219.2-201ENST00000555184 348 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC009063.1-201ENST00000563342 702 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC137800.2-201ENST00000574375 120 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC113194.1-201ENST00000606037 500 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC091965.4-201ENST00000607691 587 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC009237.17-201ENST00000618111 748 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC004009.2-201ENST00000623016 728 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 AC099654.12-201ENST00000639868 649 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC27Q2M243 AL022393.1-201ENST00000625142 1677 ntBASIC6.54□□□□□ -1.36
CCDC27Q2M243 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC27Q2M243 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC27Q2M243 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC27Q2M243 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC27Q2M243 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 RNA5SP455-201ENST00000365190 119 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 SNORD82-201ENST00000365530 70 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RNU5A-6P-201ENST00000384136 116 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RPL31P1-201ENST00000398116 372 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC008065.1-201ENST00000428525 348 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC27Q2M243 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AL356276.2-201ENST00000435919 558 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 PSMD10P3-201ENST00000437000 448 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RPL7P11-201ENST00000437586 658 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 MTATP6P13-201ENST00000438531 667 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AL031667.1-201ENST00000440222 725 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AP000542.1-201ENST00000448473 371 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 Z82190.1-201ENST00000454534 490 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 MTCO1P42-201ENST00000457379 726 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RN7SL97P-201ENST00000486780 299 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 MRPS33P2-201ENST00000507850 322 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RN7SKP66-201ENST00000516681 231 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 RN7SKP147-201ENST00000517154 244 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC044860.2-201ENST00000561005 179 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC011840.5-201ENST00000582125 771 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC087763.1-201ENST00000603391 286 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AL445222.1-201ENST00000607259 628 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AP001506.1-201ENST00000615444 211 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 U6atac.1-201ENST00000616025 117 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC068870.2-201ENST00000620635 389 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC27Q2M243 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC27Q2M243 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC27Q2M243 AP002001.2-201ENST00000529025 1469 ntBASIC6.53□□□□□ -1.36
CCDC27Q2M243 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC27Q2M243 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC27Q2M243 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.52□□□□□ -1.36
CCDC27Q2M243 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC27Q2M243 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 RNU6-28P-201ENST00000362378 107 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 RN7SKP104-201ENST00000362605 328 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 SNORA74A-201ENST00000364089 198 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 RNU6-259P-201ENST00000383999 107 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 RNU6-297P-201ENST00000384636 107 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 Z97832.1-201ENST00000402490 328 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 RNU6-248P-201ENST00000410720 107 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 HMGB3P23-201ENST00000414981 585 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 AL445669.1-201ENST00000426743 755 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 AC034222.1-201ENST00000494052 532 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC27Q2M243 SNORD116-26-201ENST00000516006 96 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 AC016957.1-201ENST00000534895 309 ntBASIC6.52□□□□□ -1.37
CCDC27Q2M243 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms