Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 RPL7P27-201ENST00000403775 720 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AL445189.1-201ENST00000405722 338 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC092745.2-202ENST00000411880 369 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 LIPT1P1-201ENST00000415870 1186 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC246680.2-201ENST00000422106 389 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX1Q15475 CBX1P4-201ENST00000439415 457 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 MTCO1P53-201ENST00000441633 699 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 RPL21P89-201ENST00000444021 467 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX1Q15475 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC243772.1-201ENST00000451620 410 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 ACTG1P13-201ENST00000486987 1043 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 MTND2P32-201ENST00000521584 1038 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 HMGB1P1-201ENST00000522557 636 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC007991.1-201ENST00000522680 631 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 OR8I1P-201ENST00000529291 931 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 AC115621.1-201ENST00000604653 858 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC073387.2-201ENST00000604797 784 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC013468.1-201ENST00000608680 598 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 RNVU1-4-201ENST00000612985 164 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC139769.3-201ENST00000618383 175 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 U6.48-201ENST00000618523 106 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 AC015726.3-201ENST00000624501 418 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 RNA5SP196-201ENST00000625967 102 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 AP000553.6-201ENST00000641242 118 ntBASIC3.78□□□□□ -1.8
SIX1Q15475 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX1Q15475 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SIX1Q15475 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SIX1Q15475 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX1Q15475 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.78□□□□□ -1.81
SIX1Q15475 ASNSP1-201ENST00000518311 1939 ntBASIC3.78□□□□□ -1.81
SIX1Q15475 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
SIX1Q15475 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX1Q15475 MTND4P31-201ENST00000425607 1343 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX1Q15475 RNU6-984P-201ENST00000363236 109 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 RNU6-304P-201ENST00000364855 107 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 RNU6-317P-201ENST00000384031 107 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX1Q15475 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX1Q15475 MIR1303-201ENST00000408625 86 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 RN7SKP27-201ENST00000410684 333 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 Z80107.1-201ENST00000436830 412 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 SETD6P1-201ENST00000444575 317 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AL358794.1-201ENST00000445689 381 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AC239367.2-201ENST00000447309 705 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 EXOSC3P1-201ENST00000448649 500 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 TRBV8-2-201ENST00000475637 270 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX1Q15475 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX1Q15475 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX1Q15475 RNU6-1028P-201ENST00000517164 93 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX1Q15475 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.77□□□□□ -1.81
SIX1Q15475 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC006518.2-201ENST00000542513 940 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AC087897.1-201ENST00000550134 156 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX1Q15475 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 AL109618.2-201ENST00000605527 211 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 AC104985.3-201ENST00000623479 597 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SIX1Q15475 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX1Q15475 AC090971.4-201ENST00000560291 1800 ntBASIC3.77□□□□□ -1.81
SIX1Q15475 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SIX1Q15475 AC009313.2-201ENST00000417893 1941 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC068647.1-201ENST00000489539 2265 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 NSRP1P1-201ENST00000444067 1693 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX1Q15475 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX1Q15475 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms