Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.88□□□□□ -1.79
CACNA1SQ13698 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CACNA1SQ13698 MIR3945-201ENST00000581853 98 ntBASIC3.88□□□□□ -1.79
CACNA1SQ13698 AC010809.3-201ENST00000621310 641 ntBASIC3.88□□□□□ -1.79
CACNA1SQ13698 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1SQ13698 HSPA8P1-201ENST00000425843 1833 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1SQ13698 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 U3.12-201ENST00000364498 214 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1SQ13698 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 AC126389.1-201ENST00000477436 290 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 RN7SL432P-201ENST00000484057 298 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1SQ13698 RPL12P22-201ENST00000519073 490 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 AC103881.1-201ENST00000603476 538 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 OR2AS2P-201ENST00000606902 342 ntBASIC3.87□□□□□ -1.79
CACNA1SQ13698 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1SQ13698 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1SQ13698 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 RNU6-55P-201ENST00000411092 107 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 RNU6-954P-201ENST00000411355 107 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC015917.1-201ENST00000579654 510 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC104446.1-201ENST00000613728 1321 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC138393.1-206ENST00000540997 1886 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 RPS12P5-201ENST00000423449 371 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 MTCO1P51-201ENST00000427672 1060 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 SNRPFP2-201ENST00000440710 251 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 HMGB1P5-202ENST00000451497 985 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AL109933.2-201ENST00000452651 260 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC087312.1-201ENST00000471411 480 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 MIR2276-201ENST00000516886 89 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC067852.4-201ENST00000590314 478 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AL049844.2-201ENST00000604280 628 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 AC015849.2-201ENST00000605738 409 ntBASIC3.86□□□□□ -1.79
CACNA1SQ13698 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.86□□□□□ -1.79
CACNA1SQ13698 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
CACNA1SQ13698 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1SQ13698 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1SQ13698 BX679664.1-201ENST00000434429 253 ntBASIC3.85□□□□□ -1.79
CACNA1SQ13698 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1SQ13698 SNORA70.19-201ENST00000516717 90 ntBASIC3.85□□□□□ -1.79
CACNA1SQ13698 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.85□□□□□ -1.79
CACNA1SQ13698 uc_338.32-201ENST00000615087 172 ntBASIC3.85□□□□□ -1.79
CACNA1SQ13698 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1SQ13698 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1SQ13698 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1SQ13698 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1SQ13698 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1SQ13698 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.84□□□□□ -1.79
CACNA1SQ13698 AC019097.1-201ENST00000424783 735 ntBASIC3.84□□□□□ -1.79
CACNA1SQ13698 ARL5AP4-201ENST00000430731 512 ntBASIC3.84□□□□□ -1.79
CACNA1SQ13698 AC093156.1-201ENST00000440382 670 ntBASIC3.84□□□□□ -1.79
CACNA1SQ13698 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1SQ13698 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1SQ13698 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1SQ13698 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1SQ13698 AC090971.4-201ENST00000560291 1800 ntBASIC3.84□□□□□ -1.79
CACNA1SQ13698 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CACNA1SQ13698 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CACNA1SQ13698 GCNT6-201ENST00000379591 934 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 GLRXP1-201ENST00000423261 334 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 OOSP1P1-201ENST00000423265 274 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 Z99127.3-201ENST00000448158 395 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 RNU1-41P-201ENST00000516161 162 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 RNU1-48P-201ENST00000516400 162 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.84□□□□□ -1.8
CACNA1SQ13698 AC245100.7-201ENST00000609678 442 ntBASIC3.84□□□□□ -1.8
CACNA1SQ13698 OR5BR1P-201ENST00000524992 1330 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 NEAT1-202ENST00000501122 22743 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1SQ13698 AL359693.1-201ENST00000614959 2407 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1SQ13698 RNU6-673P-201ENST00000365084 104 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 BMS1P22-201ENST00000414726 313 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms