Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 HSPD1P15-201ENST00000505573 1122 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AC074250.1-201ENST00000511117 192 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXF1Q12946 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.96□□□□□ -1.94
FOXF1Q12946 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXF1Q12946 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.96□□□□□ -1.94
FOXF1Q12946 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 ADAM3B-201ENST00000569937 840 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 ZNF415P1-201ENST00000582279 1166 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AC084373.1-201ENST00000603311 235 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AC024220.1-201ENST00000603675 484 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AL049844.2-201ENST00000604280 628 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AC012213.4-201ENST00000606457 354 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 MIR8058-201ENST00000615737 89 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 AC145207.9-201ENST00000623802 325 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXF1Q12946 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 MIR7153-201ENST00000637758 57 ntBASIC2.96□□□□□ -1.94
FOXF1Q12946 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXF1Q12946 ZNF542P-204ENST00000482727 1305 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
FOXF1Q12946 RNA5SP267-201ENST00000364893 126 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 EI24P2-201ENST00000397776 1076 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AL357075.1-201ENST00000404107 726 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 MTCYBP7-201ENST00000419540 1134 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 FAR1P1-201ENST00000427163 934 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AL392003.1-201ENST00000434394 243 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 USP9YP7-201ENST00000436723 430 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.95□□□□□ -1.94
FOXF1Q12946 CCRL1P1-201ENST00000449542 1053 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 USP9YP32-201ENST00000452432 430 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 RNU6-1218P-201ENST00000458990 108 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC091153.1-201ENST00000466297 402 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 AC010627.1-201ENST00000503819 1294 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXF1Q12946 SLC25A15P5-201ENST00000508033 253 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC117525.1-201ENST00000515228 503 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 SMARCE1P4-201ENST00000523647 241 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 HIGD1AP1-201ENST00000550979 275 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 AC005412.1-201ENST00000580812 1049 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 CKS1BP3-201ENST00000600888 237 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC090953.1-201ENST00000604305 1092 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC009948.4-201ENST00000604692 675 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC009464.1-201ENST00000615731 469 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 AC004777.1-201ENST00000624317 287 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
FOXF1Q12946 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.95□□□□□ -1.94
FOXF1Q12946 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
FOXF1Q12946 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.94□□□□□ -1.94
FOXF1Q12946 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
FOXF1Q12946 RNU1-75P-201ENST00000347264 129 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 PTMAP5-201ENST00000393073 333 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 TAF9BP1-201ENST00000396646 746 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 SKINT1L-201ENST00000401057 817 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AL158156.1-201ENST00000422509 473 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.94□□□□□ -1.94
FOXF1Q12946 AL451062.2-201ENST00000427515 271 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.94□□□□□ -1.94
FOXF1Q12946 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.94□□□□□ -1.94
FOXF1Q12946 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.94□□□□□ -1.94
FOXF1Q12946 AL591503.2-201ENST00000442314 1005 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 Z99127.3-201ENST00000448158 395 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 HMGN2P7-201ENST00000456186 273 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 RPS27P29-201ENST00000463110 252 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AC034236.1-201ENST00000469891 373 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 TRAV31-201ENST00000502780 342 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
FOXF1Q12946 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.94□□□□□ -1.94
FOXF1Q12946 AC110794.1-201ENST00000505816 425 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.94□□□□□ -1.94
FOXF1Q12946 RN7SKP289-201ENST00000517244 295 ntBASIC2.94□□□□□ -1.94
FOXF1Q12946 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.94□□□□□ -1.94
FOXF1Q12946 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms