Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN1BQ07699 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCN1BQ07699 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN1BQ07699 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCN1BQ07699 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCN1BQ07699 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AIMP1P1-201ENST00000418670 937 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC069213.2-201ENST00000420238 366 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 MRPS36P1-201ENST00000421291 307 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RAD23BP1-201ENST00000421404 1227 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RPL7P44-201ENST00000424827 742 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RPL21P66-201ENST00000426566 466 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC073648.4-201ENST00000442655 781 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC239367.2-201ENST00000447309 705 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC108463.1-201ENST00000450258 347 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 BTF3P5-201ENST00000457252 467 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RPS3AP41-201ENST00000462701 778 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC108734.3-201ENST00000481241 1165 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC069499.1-201ENST00000489433 509 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RPL36AP41-201ENST00000493820 306 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RPL21P131-201ENST00000497298 483 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC008638.1-201ENST00000506035 866 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC119751.4-201ENST00000507498 357 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC113347.3-201ENST00000509113 148 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 NARSP2-201ENST00000518524 679 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 BRD9P1-201ENST00000529855 560 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 OR4P1P-201ENST00000530808 1136 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 TOMM20P2-201ENST00000540082 421 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN1BQ07699 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC125611.1-201ENST00000549563 229 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AL110118.1-201ENST00000553543 400 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 MIR4436B2-201ENST00000581415 91 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 MIR4436B1-201ENST00000583272 91 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AL133338.2-201ENST00000604292 736 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN1BQ07699 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC024257.5-201ENST00000612739 531 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC104763.3-201ENST00000613765 618 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 MIR7155-201ENST00000615925 56 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC073348.1-201ENST00000623002 331 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC006963.1-201ENST00000624003 1052 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC048347.1-201ENST00000624621 427 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 AC010608.3-201ENST00000625048 527 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC107982.1-201ENST00000507171 1300 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC010928.1-201ENST00000592477 1447 ntBASIC3.84□□□□□ -1.79
SCN1BQ07699 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCN1BQ07699 AC095050.2-201ENST00000510748 1458 ntBASIC3.84□□□□□ -1.8
SCN1BQ07699 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCN1BQ07699 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCN1BQ07699 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCN1BQ07699 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 RNU6-1181P-201ENST00000384191 106 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SCN1BQ07699 SNRPEP2-201ENST00000397592 279 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 MIR298-201ENST00000401212 88 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 MIR1911-201ENST00000410783 80 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 RN7SKP106-201ENST00000410832 272 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 VN1R51P-201ENST00000411675 945 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 RAD23BP2-201ENST00000416003 1207 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 BX510359.2-201ENST00000417920 305 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms