Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 RNU6-374P-201ENST00000364146 108 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CX3CL1P78423 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CX3CL1P78423 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 RN7SKP216-201ENST00000411050 312 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AL139128.1-201ENST00000413921 941 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 USP9YP9-201ENST00000429406 715 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 TXNL1P1-201ENST00000429528 554 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AL049745.1-201ENST00000433953 286 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AL772161.1-201ENST00000439130 476 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC011753.3-201ENST00000443436 406 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 RPL29P29-201ENST00000448725 423 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 DDX39BP2-208ENST00000453923 258 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 RPL35AP28-201ENST00000459730 331 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 RPL5P30-201ENST00000465511 891 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 PLGLA-201ENST00000465668 449 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC104763.1-201ENST00000475274 360 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 RPL36AP41-201ENST00000493820 306 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 TMEM251P1-201ENST00000503717 318 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC093767.1-201ENST00000504523 156 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 OR51K1P-201ENST00000510214 950 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 TMEM248P1-201ENST00000510579 951 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 IGKV2D-36-201ENST00000518643 226 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 IGLVIV-53-201ENST00000520107 367 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC069240.1-201ENST00000548774 375 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 CENPUP2-201ENST00000555897 1186 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 ISCA1P3-201ENST00000577104 373 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 MAGOH2P-202ENST00000584384 429 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 BNIP3P24-201ENST00000593398 557 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AL009028.1-201ENST00000604895 802 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC124312.4-201ENST00000605533 310 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AL159169.3-201ENST00000608871 561 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 Mico1.1-201ENST00000611698 204 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AL354976.1-201ENST00000613843 387 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 MIR6730-201ENST00000622213 67 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 AC231657.1-201ENST00000624313 397 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 MTCO1P23-201ENST00000415223 1526 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC010928.1-201ENST00000592477 1447 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CL1P78423 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 ZNF137P-201ENST00000456718 1920 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 LINC00561-201ENST00000565815 2738 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC074029.4-201ENST00000624796 1859 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 AL079343.1-201ENST00000572358 1771 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 ZNF734P-201ENST00000419494 1534 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 SNORA71.2-201ENST00000364941 134 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CX3CL1P78423 RNU6-730P-201ENST00000383954 104 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 RNU4-72P-201ENST00000410754 173 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms