Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TPT1P3-201ENST00000492841 512 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.11□□□□□ -1.91
ACTBP60709 TXNP6-201ENST00000510190 310 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC108064.1-201ENST00000513791 460 ntBASIC3.11□□□□□ -1.91
ACTBP60709 RNU6-579P-201ENST00000516879 102 ntBASIC3.11□□□□□ -1.91
ACTBP60709 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.11□□□□□ -1.91
ACTBP60709 AP003717.3-201ENST00000544832 1180 ntBASIC3.11□□□□□ -1.91
ACTBP60709 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 AC004024.1-201ENST00000549244 247 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.11□□□□□ -1.91
ACTBP60709 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.11□□□□□ -1.91
ACTBP60709 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 AC015726.1-201ENST00000602353 681 ntBASIC3.11□□□□□ -1.91
ACTBP60709 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.11□□□□□ -1.91
ACTBP60709 U73479.1-201ENST00000618062 168 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AF117829.1-206ENST00000621883 3802 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AL732618.1-201ENST00000623251 301 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 AP000553.6-201ENST00000641242 118 ntBASIC3.11□□□□□ -1.91
ACTBP60709 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ACTBP60709 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 AC068647.1-201ENST00000489539 2265 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AP001350.1-201ENST00000601906 1524 ntBASIC3.1□□□□□ -1.91
ACTBP60709 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 RNA5SP283-201ENST00000365604 119 ntBASIC3.1□□□□□ -1.91
ACTBP60709 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
ACTBP60709 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ACTBP60709 AL138880.1-201ENST00000405824 642 ntBASIC3.1□□□□□ -1.91
ACTBP60709 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ACTBP60709 AC068533.1-201ENST00000418542 415 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AJ239321.1-201ENST00000424255 564 ntBASIC3.1□□□□□ -1.91
ACTBP60709 RPL21P66-201ENST00000426566 466 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.1□□□□□ -1.91
ACTBP60709 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.1□□□□□ -1.91
ACTBP60709 OR51AB1P-201ENST00000429046 620 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.1□□□□□ -1.91
ACTBP60709 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.1□□□□□ -1.91
ACTBP60709 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.1□□□□□ -1.91
ACTBP60709 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AL161747.1-201ENST00000480068 358 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AC010460.1-201ENST00000507087 466 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC022695.1-201ENST00000522089 237 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AP001207.1-201ENST00000524051 481 ntBASIC3.1□□□□□ -1.91
ACTBP60709 OR7E13P-201ENST00000526052 910 ntBASIC3.1□□□□□ -1.91
ACTBP60709 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.1□□□□□ -1.91
ACTBP60709 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AP002812.4-201ENST00000532139 286 ntBASIC3.1□□□□□ -1.91
ACTBP60709 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC092868.3-201ENST00000560515 784 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.1□□□□□ -1.91
ACTBP60709 HMGN2P28-201ENST00000606102 262 ntBASIC3.1□□□□□ -1.91
ACTBP60709 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
ACTBP60709 AC022149.2-201ENST00000621061 203 ntBASIC3.1□□□□□ -1.91
ACTBP60709 AC068724.3-201ENST00000625906 87 ntBASIC3.1□□□□□ -1.91
ACTBP60709 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ACTBP60709 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.1□□□□□ -1.91
ACTBP60709 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
ACTBP60709 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
ACTBP60709 MIR30E-201ENST00000362104 92 ntBASIC3.09□□□□□ -1.91
ACTBP60709 SNORA73.2-201ENST00000364946 201 ntBASIC3.09□□□□□ -1.91
ACTBP60709 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.09□□□□□ -1.91
ACTBP60709 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
ACTBP60709 PPIAP31-201ENST00000405422 495 ntBASIC3.09□□□□□ -1.91
ACTBP60709 U3.39-201ENST00000408569 239 ntBASIC3.09□□□□□ -1.91
ACTBP60709 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
ACTBP60709 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.09□□□□□ -1.91
ACTBP60709 AC093578.1-201ENST00000415219 368 ntBASIC3.09□□□□□ -1.91
ACTBP60709 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.09□□□□□ -1.91
ACTBP60709 AL513174.1-201ENST00000423182 629 ntBASIC3.09□□□□□ -1.91
ACTBP60709 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.09□□□□□ -1.91
ACTBP60709 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.09□□□□□ -1.91
ACTBP60709 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.09□□□□□ -1.91
ACTBP60709 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.09□□□□□ -1.91
ACTBP60709 CYCSP53-201ENST00000455540 265 ntBASIC3.09□□□□□ -1.91
ACTBP60709 OR9M1P-201ENST00000459641 921 ntBASIC3.09□□□□□ -1.91
ACTBP60709 HMGB1P38-201ENST00000490557 577 ntBASIC3.09□□□□□ -1.91
ACTBP60709 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
ACTBP60709 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.09□□□□□ -1.91
ACTBP60709 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.09□□□□□ -1.91
ACTBP60709 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.09□□□□□ -1.91
ACTBP60709 RN7SKP289-201ENST00000517244 295 ntBASIC3.09□□□□□ -1.91
ACTBP60709 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.09□□□□□ -1.91
ACTBP60709 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms