Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 RNU6-1279P-201ENST00000383917 103 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 RPL7P60-201ENST00000397636 735 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL024507.1-201ENST00000412741 274 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 RWDD4P2-201ENST00000426392 563 ntBASIC3.5□□□□□ -1.85
LIM2P55344 MOB1AP1-201ENST00000430903 535 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 ARF4P4-201ENST00000439608 520 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.5□□□□□ -1.85
LIM2P55344 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.5□□□□□ -1.85
LIM2P55344 NOTCH2P1-201ENST00000443481 624 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL592437.1-201ENST00000443781 492 ntBASIC3.5□□□□□ -1.85
LIM2P55344 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.5□□□□□ -1.85
LIM2P55344 AC233982.1-201ENST00000451247 436 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC133473.1-201ENST00000455173 299 ntBASIC3.5□□□□□ -1.85
LIM2P55344 RPL21P18-201ENST00000469899 480 ntBASIC3.5□□□□□ -1.85
LIM2P55344 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.5□□□□□ -1.85
LIM2P55344 MTATP6P22-201ENST00000507369 598 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC110792.2-201ENST00000510278 224 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.5□□□□□ -1.85
LIM2P55344 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 IGJP1-201ENST00000522682 475 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC008011.1-201ENST00000545989 227 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AL121766.1-201ENST00000547436 487 ntBASIC3.5□□□□□ -1.85
LIM2P55344 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 MIR4789-201ENST00000577469 82 ntBASIC3.5□□□□□ -1.85
LIM2P55344 MIR4458-201ENST00000578872 75 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.5□□□□□ -1.85
LIM2P55344 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.5□□□□□ -1.85
LIM2P55344 AC069304.3-201ENST00000603938 1084 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC091488.1-201ENST00000604239 660 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 AC005014.3-201ENST00000605985 190 ntBASIC3.5□□□□□ -1.85
LIM2P55344 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 AL109620.1-201ENST00000618738 1197 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC007275.1-201ENST00000621243 671 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AP003476.1-201ENST00000623984 516 ntBASIC3.5□□□□□ -1.85
LIM2P55344 MIR6715B-201ENST00000637172 77 ntBASIC3.5□□□□□ -1.85
LIM2P55344 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 OR6C71P-202ENST00000641886 1107 ntBASIC3.5□□□□□ -1.85
LIM2P55344 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LIM2P55344 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.5□□□□□ -1.85
LIM2P55344 MAPK10-372ENST00000641954 3413 ntBASIC3.5□□□□□ -1.85
LIM2P55344 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIM2P55344 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 RNU6-236P-201ENST00000363886 106 ntBASIC3.49□□□□□ -1.85
LIM2P55344 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
LIM2P55344 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 RNU6-1151P-201ENST00000384684 107 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AC025750.1-201ENST00000399891 379 ntBASIC3.49□□□□□ -1.85
LIM2P55344 HSPD1P16-201ENST00000402302 394 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AL391417.1-201ENST00000404100 426 ntBASIC3.49□□□□□ -1.85
LIM2P55344 RN7SKP202-201ENST00000410439 330 ntBASIC3.49□□□□□ -1.85
LIM2P55344 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 HMGB3P20-201ENST00000417997 600 ntBASIC3.49□□□□□ -1.85
LIM2P55344 RPL17P36-201ENST00000420302 549 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AL009174.1-201ENST00000426577 416 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.49□□□□□ -1.85
LIM2P55344 AL445584.1-201ENST00000431451 330 ntBASIC3.49□□□□□ -1.85
LIM2P55344 KCTD10P1-201ENST00000434203 625 ntBASIC3.49□□□□□ -1.85
LIM2P55344 PPIAP17-201ENST00000438507 471 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AC000041.1-201ENST00000439655 175 ntBASIC3.49□□□□□ -1.85
LIM2P55344 RRM2P4-201ENST00000441721 562 ntBASIC3.49□□□□□ -1.85
LIM2P55344 GXYLT1P1-201ENST00000446657 490 ntBASIC3.49□□□□□ -1.85
LIM2P55344 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AC099563.1-201ENST00000456086 418 ntBASIC3.49□□□□□ -1.85
LIM2P55344 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.49□□□□□ -1.85
LIM2P55344 UBE2CP3-201ENST00000502715 450 ntBASIC3.49□□□□□ -1.85
LIM2P55344 RPL7L1P13-201ENST00000511702 739 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.49□□□□□ -1.85
LIM2P55344 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LIM2P55344 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.49□□□□□ -1.85
LIM2P55344 AL049634.3-201ENST00000604968 457 ntBASIC3.49□□□□□ -1.85
LIM2P55344 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.49□□□□□ -1.85
LIM2P55344 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms