Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.93□□□□□ -1.78
SSR1P43307 API5P2-201ENST00000397055 1498 ntBASIC3.93□□□□□ -1.78
SSR1P43307 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SSR1P43307 OR5T3-201ENST00000303059 1023 ntBASIC3.93□□□□□ -1.78
SSR1P43307 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 AL353692.2-201ENST00000407054 335 ntBASIC3.93□□□□□ -1.78
SSR1P43307 SNORA3.3-201ENST00000408712 125 ntBASIC3.93□□□□□ -1.78
SSR1P43307 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.93□□□□□ -1.78
SSR1P43307 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.93□□□□□ -1.78
SSR1P43307 RPL21P40-201ENST00000428586 483 ntBASIC3.93□□□□□ -1.78
SSR1P43307 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 RPL23AP33-201ENST00000442301 452 ntBASIC3.93□□□□□ -1.78
SSR1P43307 RPL21P89-201ENST00000444021 467 ntBASIC3.93□□□□□ -1.78
SSR1P43307 HSFY6P-201ENST00000445573 403 ntBASIC3.93□□□□□ -1.78
SSR1P43307 CEACAMP10-202ENST00000495431 496 ntBASIC3.93□□□□□ -1.78
SSR1P43307 AL139099.1-201ENST00000497398 403 ntBASIC3.93□□□□□ -1.78
SSR1P43307 AC108064.1-201ENST00000513791 460 ntBASIC3.93□□□□□ -1.78
SSR1P43307 SNORA31.13-201ENST00000516624 135 ntBASIC3.93□□□□□ -1.78
SSR1P43307 RNU6-352P-201ENST00000516908 107 ntBASIC3.93□□□□□ -1.78
SSR1P43307 HMGB1P23-201ENST00000518743 568 ntBASIC3.93□□□□□ -1.78
SSR1P43307 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.93□□□□□ -1.78
SSR1P43307 IGKV2D-19-201ENST00000523346 262 ntBASIC3.93□□□□□ -1.78
SSR1P43307 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.93□□□□□ -1.78
SSR1P43307 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 MIR4425-201ENST00000580572 84 ntBASIC3.93□□□□□ -1.78
SSR1P43307 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 KATNBL1P1-201ENST00000605192 748 ntBASIC3.93□□□□□ -1.78
SSR1P43307 SNORA62.6-201ENST00000606322 83 ntBASIC3.93□□□□□ -1.78
SSR1P43307 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.93□□□□□ -1.78
SSR1P43307 CR381670.1-201ENST00000624291 1693 ntBASIC3.93□□□□□ -1.78
SSR1P43307 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SSR1P43307 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSR1P43307 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
SSR1P43307 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSR1P43307 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSR1P43307 AC068538.1-201ENST00000376856 336 ntBASIC3.92□□□□□ -1.78
SSR1P43307 MIR30B-201ENST00000384850 88 ntBASIC3.92□□□□□ -1.78
SSR1P43307 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSR1P43307 RNA5SP424-201ENST00000390988 115 ntBASIC3.92□□□□□ -1.78
SSR1P43307 Y_RNA.625-201ENST00000411256 107 ntBASIC3.92□□□□□ -1.78
SSR1P43307 RNU2-71P-201ENST00000411395 189 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AC234782.4-201ENST00000417646 1048 ntBASIC3.92□□□□□ -1.78
SSR1P43307 HMGB3P20-201ENST00000417997 600 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 SETD6P1-201ENST00000444575 317 ntBASIC3.92□□□□□ -1.78
SSR1P43307 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.92□□□□□ -1.78
SSR1P43307 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 RPL6P9-201ENST00000466502 859 ntBASIC3.92□□□□□ -1.78
SSR1P43307 TPT1P3-201ENST00000492841 512 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.92□□□□□ -1.78
SSR1P43307 RN7SKP282-201ENST00000516824 299 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.92□□□□□ -1.78
SSR1P43307 AL139174.1-201ENST00000531489 886 ntBASIC3.92□□□□□ -1.78
SSR1P43307 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 TRAV15-201ENST00000556680 249 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AC006960.3-201ENST00000561845 705 ntBASIC3.92□□□□□ -1.78
SSR1P43307 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 AC090616.5-202ENST00000582111 297 ntBASIC3.92□□□□□ -1.78
SSR1P43307 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 AC239803.2-201ENST00000610161 430 ntBASIC3.92□□□□□ -1.78
SSR1P43307 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SSR1P43307 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSR1P43307 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.92□□□□□ -1.78
SSR1P43307 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSR1P43307 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSR1P43307 RNU6-213P-201ENST00000384051 104 ntBASIC3.91□□□□□ -1.78
SSR1P43307 RNU1-101P-201ENST00000391171 127 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.91□□□□□ -1.78
SSR1P43307 AC012498.1-201ENST00000424037 437 ntBASIC3.91□□□□□ -1.78
SSR1P43307 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.91□□□□□ -1.78
SSR1P43307 RSL24D1P6-201ENST00000426934 401 ntBASIC3.91□□□□□ -1.78
SSR1P43307 RPS24P8-201ENST00000431490 402 ntBASIC3.91□□□□□ -1.78
SSR1P43307 OR2B8P-201ENST00000432841 938 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 AC006480.1-201ENST00000449887 378 ntBASIC3.91□□□□□ -1.78
SSR1P43307 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 RPS20P21-201ENST00000466859 343 ntBASIC3.91□□□□□ -1.78
SSR1P43307 GAPDHP36-201ENST00000480688 918 ntBASIC3.91□□□□□ -1.78
SSR1P43307 CEP170P1-201ENST00000502249 4587 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms