Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OR5AL2P-201ENST00000532185 920 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.57□□□□□ -1.52
CCNFP41002 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.57□□□□□ -1.52
CCNFP41002 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.57□□□□□ -1.52
CCNFP41002 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.57□□□□□ -1.52
CCNFP41002 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.57□□□□□ -1.52
CCNFP41002 RN7SL290P-201ENST00000578661 300 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC127024.5-201ENST00000580085 462 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC044792.1-201ENST00000593294 196 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC068790.5-201ENST00000602741 355 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC007497.1-201ENST00000610421 561 ntBASIC5.57□□□□□ -1.52
CCNFP41002 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.57□□□□□ -1.52
CCNFP41002 AC093648.1-201ENST00000623546 606 ntBASIC5.57□□□□□ -1.52
CCNFP41002 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNFP41002 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNFP41002 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNFP41002 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.57□□□□□ -1.52
CCNFP41002 LINC00622-201ENST00000562811 1570 ntBASIC5.57□□□□□ -1.52
CCNFP41002 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNFP41002 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
CCNFP41002 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNFP41002 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCNFP41002 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCNFP41002 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNFP41002 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNFP41002 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.56□□□□□ -1.52
CCNFP41002 AC005332.5-201ENST00000591222 2919 ntBASIC5.56□□□□□ -1.52
CCNFP41002 MTND5P28-201ENST00000438005 1594 ntBASIC5.56□□□□□ -1.52
CCNFP41002 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNFP41002 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNFP41002 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCNFP41002 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCNFP41002 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCNFP41002 RNA5SP241-201ENST00000391326 114 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC068050.1-201ENST00000394891 380 ntBASIC5.56□□□□□ -1.52
CCNFP41002 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC078974.1-201ENST00000411597 223 ntBASIC5.56□□□□□ -1.52
CCNFP41002 RPSAP35-201ENST00000413753 818 ntBASIC5.56□□□□□ -1.52
CCNFP41002 RPL36AP36-201ENST00000418616 301 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC013429.2-201ENST00000418798 781 ntBASIC5.56□□□□□ -1.52
CCNFP41002 RPS26P47-201ENST00000427219 348 ntBASIC5.56□□□□□ -1.52
CCNFP41002 OR51AB1P-201ENST00000429046 620 ntBASIC5.56□□□□□ -1.52
CCNFP41002 HMGB3P24-201ENST00000433260 622 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 BNIP3P2-201ENST00000441221 577 ntBASIC5.56□□□□□ -1.52
CCNFP41002 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNFP41002 AC004980.3-201ENST00000447046 365 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC090804.1-201ENST00000448870 490 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNFP41002 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 PRPF38AP1-201ENST00000451976 933 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC002553.2-201ENST00000453217 340 ntBASIC5.56□□□□□ -1.52
CCNFP41002 RPS20P24-201ENST00000457473 361 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNFP41002 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.56□□□□□ -1.52
CCNFP41002 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCNFP41002 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 AL138976.2-201ENST00000563989 694 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC018552.3-201ENST00000567416 561 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 AC005191.1-201ENST00000603950 358 ntBASIC5.56□□□□□ -1.52
CCNFP41002 AL136363.1-201ENST00000605349 337 ntBASIC5.56□□□□□ -1.52
CCNFP41002 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNFP41002 BX664608.1-201ENST00000610519 487 ntBASIC5.56□□□□□ -1.52
CCNFP41002 MIR6864-201ENST00000617935 70 ntBASIC5.56□□□□□ -1.52
CCNFP41002 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CCNFP41002 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 NUP58P1-201ENST00000502546 1738 ntBASIC5.56□□□□□ -1.52
CCNFP41002 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNFP41002 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNFP41002 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNFP41002 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CCNFP41002 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 OR13C1P-202ENST00000641378 2919 ntBASIC5.55□□□□□ -1.52
CCNFP41002 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 LINC01963-201ENST00000562038 3148 ntBASIC5.55□□□□□ -1.52
CCNFP41002 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNFP41002 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNFP41002 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNFP41002 RNU4-73P-201ENST00000363164 141 ntBASIC5.55□□□□□ -1.52
CCNFP41002 RNA5SP394-201ENST00000364216 119 ntBASIC5.55□□□□□ -1.52
CCNFP41002 Y_RNA.279-201ENST00000364763 95 ntBASIC5.55□□□□□ -1.52
CCNFP41002 SNORA20.2-201ENST00000383922 131 ntBASIC5.55□□□□□ -1.52
CCNFP41002 Y_RNA.529-201ENST00000384586 119 ntBASIC5.55□□□□□ -1.52
CCNFP41002 RPL34P3-201ENST00000421454 338 ntBASIC5.55□□□□□ -1.52
CCNFP41002 MTCO2P5-201ENST00000422621 426 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AL353777.1-201ENST00000425552 326 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms