Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC13P31276 AC068057.2-201ENST00000624047 895 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HOXC13P31276 AL136520.1-201ENST00000600311 1322 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AL355578.1-201ENST00000607405 1328 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 GABPAP-201ENST00000419271 1356 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 SNORA73.2-201ENST00000364946 201 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 RNU11-4P-201ENST00000391149 133 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 PTMAP2-201ENST00000397627 327 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AF228730.1-201ENST00000397972 663 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 SSXP10-201ENST00000402595 565 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL355143.1-201ENST00000407101 841 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC073264.1-201ENST00000411508 416 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC069282.1-201ENST00000411911 526 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 AL009174.1-201ENST00000426577 416 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC013262.1-201ENST00000426710 252 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 RRM2P4-201ENST00000441721 562 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL592437.1-201ENST00000443781 492 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 RPS27P23-201ENST00000487608 251 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC119751.4-201ENST00000507498 357 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC099522.1-202ENST00000514718 367 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC010735.1-201ENST00000567305 1026 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL121834.1-201ENST00000572284 509 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC114878.2-201ENST00000604863 1251 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AC027449.1-201ENST00000608890 407 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 AL391834.2-201ENST00000609982 546 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC091046.2-201ENST00000620775 665 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC13P31276 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 MTND4P8-201ENST00000514997 1362 ntBASIC4.35□□□□□ -1.71
HOXC13P31276 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC13P31276 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC13P31276 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
HOXC13P31276 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HOXC13P31276 RNU6-1151P-201ENST00000384684 107 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 RPL17P50-201ENST00000396131 546 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXC13P31276 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 AL050341.1-201ENST00000447743 313 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AL500522.2-201ENST00000448562 343 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXC13P31276 RAD23BP3-201ENST00000454157 1152 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 RPL21P18-201ENST00000469899 480 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 RNU6-416P-201ENST00000516265 103 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC008802.1-201ENST00000519121 791 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC13P31276 MTND2P38-201ENST00000522536 667 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXC13P31276 AC006518.2-201ENST00000542513 940 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC13P31276 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC13P31276 AC012182.1-201ENST00000570133 895 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC13P31276 MIR4286-201ENST00000580651 93 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms