Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXA6P31267 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXA6P31267 AC021755.1-201ENST00000559747 1447 ntBASIC3.6□□□□□ -1.83
HOXA6P31267 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HOXA6P31267 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXA6P31267 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXA6P31267 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXA6P31267 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA6P31267 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA6P31267 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA6P31267 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA6P31267 RNU4-35P-201ENST00000362588 141 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 Y_RNA.500-201ENST00000384466 111 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HOXA6P31267 SNORD17-201ENST00000390930 237 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 RPL31P2-201ENST00000413849 377 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA6P31267 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA6P31267 AC096638.2-201ENST00000434965 711 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 CCRL1P1-201ENST00000449542 1053 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 RPL26P28-201ENST00000451325 435 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA6P31267 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 RPL30P11-201ENST00000495304 339 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AC090136.1-201ENST00000520009 240 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA6P31267 AC024224.1-201ENST00000538284 609 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXA6P31267 OR6C73P-201ENST00000546432 358 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA6P31267 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA6P31267 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA6P31267 AC027281.1-201ENST00000574178 758 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AL732618.1-201ENST00000623251 301 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 AP003355.3-201ENST00000623465 114 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
HOXA6P31267 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA6P31267 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXA6P31267 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXA6P31267 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXA6P31267 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 MTND5P3-201ENST00000438536 1800 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 RAD1P1-201ENST00000231383 813 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 TAF9BP1-201ENST00000396646 746 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 UBA52P6-201ENST00000399822 382 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 MTCO1P45-201ENST00000431457 267 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 RPL37P3-201ENST00000456825 293 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 S100A11P2-201ENST00000467589 312 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AC146507.1-201ENST00000468335 354 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 FTH1P24-201ENST00000503502 462 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AC025554.1-201ENST00000505641 188 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 PHBP14-201ENST00000512887 367 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 RN7SKP289-201ENST00000517244 295 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA6P31267 MIR5004-201ENST00000579078 107 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
HOXA6P31267 MRPS35P3-201ENST00000603189 709 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AC011468.4-201ENST00000603942 409 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AL390816.3-201ENST00000604527 1066 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 AP003392.5-201ENST00000607857 415 ntBASIC3.58□□□□□ -1.84
HOXA6P31267 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA6P31267 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA6P31267 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA6P31267 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA6P31267 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA6P31267 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA6P31267 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA6P31267 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA6P31267 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA6P31267 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA6P31267 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 HLFP1-201ENST00000402375 499 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 AL122016.1-201ENST00000403365 367 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 AC004022.2-201ENST00000413824 193 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 HSFY4P-201ENST00000415994 1181 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 RPL21P112-201ENST00000434403 463 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA6P31267 AL645931.1-201ENST00000439737 410 ntBASIC3.57□□□□□ -1.84
HOXA6P31267 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA6P31267 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms