Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNA5SP50-201ENST00000363731 107 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 RNU1-33P-201ENST00000364249 162 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 OR4K6P-201ENST00000416478 897 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 SAGE2P-201ENST00000420011 2126 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 IPMKP1-201ENST00000425988 855 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AL009174.1-201ENST00000426577 416 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF1P30408 HLA-N-201ENST00000437516 135 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 SNORA71B-202ENST00000439232 272 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AL357520.1-201ENST00000441557 453 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC004865.1-201ENST00000442276 1003 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 HMGB3P21-201ENST00000452483 547 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AC005008.1-201ENST00000456151 612 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 RNA5SP103-201ENST00000459503 118 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 NAP1L1P3-201ENST00000462291 880 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AL136126.1-201ENST00000473603 402 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC079203.1-201ENST00000487972 404 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF1P30408 TCP11X3P-202ENST00000514289 1254 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF1P30408 RN7SKP82-201ENST00000516786 223 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 FTH1P11-201ENST00000517577 551 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF1P30408 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF1P30408 NDUFS5P6-201ENST00000529136 295 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AC087897.1-201ENST00000550134 156 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AC074029.1-201ENST00000552531 1044 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.71□□□□□ -1.66
TM4SF1P30408 AL606834.3-201ENST00000602615 496 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC069304.3-201ENST00000603938 1084 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 YPEL5P2-201ENST00000605553 359 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AC104763.3-201ENST00000613765 618 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.71□□□□□ -1.66
TM4SF1P30408 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF1P30408 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF1P30408 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC007823.1-201ENST00000569932 1566 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 MFSD8-236ENST00000641509 4050 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF1P30408 MIR122-201ENST00000385044 85 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 PRRC2CP1-201ENST00000404428 159 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 USP9YP21-201ENST00000420603 432 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 RPL30P3-201ENST00000424262 333 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 RPL23AP15-201ENST00000450202 459 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC118282.2-201ENST00000508739 374 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 TPT1P8-201ENST00000510120 555 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC005351.1-201ENST00000511152 786 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC021451.1-201ENST00000523498 1129 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF1P30408 AL022067.1-201ENST00000602426 454 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC096947.1-201ENST00000603233 470 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC006077.1-201ENST00000604746 343 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AC138393.1-206ENST00000540997 1886 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.7□□□□□ -1.66
TM4SF1P30408 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 SGO1P1-201ENST00000603525 1447 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
TM4SF1P30408 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF1P30408 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.69□□□□□ -1.66
TM4SF1P30408 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.69□□□□□ -1.66
TM4SF1P30408 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM4SF1P30408 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TM4SF1P30408 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM4SF1P30408 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM4SF1P30408 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.69□□□□□ -1.66
TM4SF1P30408 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.69□□□□□ -1.66
TM4SF1P30408 RNU5E-10P-201ENST00000363506 118 ntBASIC4.69□□□□□ -1.66
TM4SF1P30408 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
TM4SF1P30408 MIR16-1-201ENST00000385271 89 ntBASIC4.69□□□□□ -1.66
TM4SF1P30408 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM4SF1P30408 HDGFP1-201ENST00000405943 252 ntBASIC4.69□□□□□ -1.66
TM4SF1P30408 BTF3P8-201ENST00000414577 526 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms