Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RXRBP28702 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 ENSAP3-201ENST00000312710 333 ntBASIC6.45□□□□□ -1.38
RXRBP28702 RPL21P132-201ENST00000331267 462 ntBASIC6.45□□□□□ -1.38
RXRBP28702 RNU6-433P-201ENST00000363216 104 ntBASIC6.45□□□□□ -1.38
RXRBP28702 SNORA2.3-201ENST00000383920 135 ntBASIC6.45□□□□□ -1.38
RXRBP28702 Y_RNA.394-201ENST00000383942 103 ntBASIC6.45□□□□□ -1.38
RXRBP28702 SNORA70.10-201ENST00000384515 134 ntBASIC6.45□□□□□ -1.38
RXRBP28702 MIR200C-201ENST00000384980 68 ntBASIC6.45□□□□□ -1.38
RXRBP28702 SNORA40.3-201ENST00000390964 122 ntBASIC6.45□□□□□ -1.38
RXRBP28702 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.45□□□□□ -1.38
RXRBP28702 AC007390.1-201ENST00000415722 356 ntBASIC6.45□□□□□ -1.38
RXRBP28702 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRBP28702 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 AC073410.1-201ENST00000435125 589 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRBP28702 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRBP28702 RPL39P6-201ENST00000448289 150 ntBASIC6.45□□□□□ -1.38
RXRBP28702 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 NIPA2P5-201ENST00000452282 464 ntBASIC6.45□□□□□ -1.38
RXRBP28702 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.45□□□□□ -1.38
RXRBP28702 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.45□□□□□ -1.38
RXRBP28702 AC079804.1-201ENST00000461922 436 ntBASIC6.45□□□□□ -1.38
RXRBP28702 RPS26P24-201ENST00000497656 331 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AC018710.1-201ENST00000506509 158 ntBASIC6.45□□□□□ -1.38
RXRBP28702 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRBP28702 AC098976.1-201ENST00000513014 541 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 IGLVIV-65-201ENST00000517313 360 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRBP28702 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 HMGB1P33-201ENST00000563485 527 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AL009028.1-201ENST00000604895 802 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AL050343.2-201ENST00000607338 280 ntBASIC6.45□□□□□ -1.38
RXRBP28702 AC107214.2-201ENST00000608204 634 ntBASIC6.45□□□□□ -1.38
RXRBP28702 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRBP28702 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RXRBP28702 AC239868.2-201ENST00000564237 4527 ntBASIC6.45□□□□□ -1.38
RXRBP28702 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RXRBP28702 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRBP28702 AC117529.2-201ENST00000512159 2068 ntBASIC6.45□□□□□ -1.38
RXRBP28702 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
RXRBP28702 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.44□□□□□ -1.38
RXRBP28702 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RXRBP28702 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.44□□□□□ -1.38
RXRBP28702 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 RNU5F-6P-201ENST00000362979 116 ntBASIC6.44□□□□□ -1.38
RXRBP28702 RN7SKP153-201ENST00000365026 316 ntBASIC6.44□□□□□ -1.38
RXRBP28702 RN7SKP177-201ENST00000410567 355 ntBASIC6.44□□□□□ -1.38
RXRBP28702 RN7SKP159-201ENST00000410657 292 ntBASIC6.44□□□□□ -1.38
RXRBP28702 CBX1P3-201ENST00000413296 527 ntBASIC6.44□□□□□ -1.38
RXRBP28702 MTND2P23-201ENST00000422990 651 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.44□□□□□ -1.38
RXRBP28702 AC005534.2-201ENST00000431047 433 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.44□□□□□ -1.38
RXRBP28702 RPS29P9-201ENST00000440360 171 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.44□□□□□ -1.38
RXRBP28702 MTCYBP6-201ENST00000441810 138 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.44□□□□□ -1.38
RXRBP28702 NOP56P2-201ENST00000447491 769 ntBASIC6.44□□□□□ -1.38
RXRBP28702 UQCRHP4-201ENST00000471686 272 ntBASIC6.44□□□□□ -1.38
RXRBP28702 SNRPCP3-201ENST00000474888 476 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC073073.1-201ENST00000493920 463 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC114967.1-201ENST00000504890 259 ntBASIC6.44□□□□□ -1.38
RXRBP28702 HMGN1P13-201ENST00000505795 138 ntBASIC6.44□□□□□ -1.38
RXRBP28702 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RXRBP28702 LRRC34P2-201ENST00000514850 553 ntBASIC6.44□□□□□ -1.38
RXRBP28702 Y_RNA.675-201ENST00000516389 149 ntBASIC6.44□□□□□ -1.38
RXRBP28702 RNU6-430P-201ENST00000517078 107 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC022360.1-201ENST00000521058 340 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.44□□□□□ -1.38
RXRBP28702 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.44□□□□□ -1.38
RXRBP28702 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.44□□□□□ -1.38
RXRBP28702 AC010928.3-201ENST00000587712 541 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC068020.1-201ENST00000594215 661 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC130352.1-201ENST00000602979 661 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AL035413.2-201ENST00000604801 525 ntBASIC6.44□□□□□ -1.38
RXRBP28702 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RXRBP28702 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 SEC63P2-201ENST00000503863 1939 ntBASIC6.44□□□□□ -1.38
RXRBP28702 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.44□□□□□ -1.38
RXRBP28702 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRBP28702 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.44□□□□□ -1.38
RXRBP28702 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms