Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.1□□□□□ -1.91
COL5A1P20908 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AC140076.1-201ENST00000449897 361 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 RPS4XP13-201ENST00000483219 789 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 YWHAEP4-201ENST00000505390 198 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.1□□□□□ -1.91
COL5A1P20908 AC022784.5-201ENST00000522241 437 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AP001636.2-201ENST00000525517 696 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 EIF4EP5-201ENST00000528228 640 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.1□□□□□ -1.91
COL5A1P20908 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
COL5A1P20908 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.1□□□□□ -1.91
COL5A1P20908 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 uc_338.25-201ENST00000613756 156 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AL162574.2-201ENST00000614618 657 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AL137790.1-201ENST00000634283 177 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL5A1P20908 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL5A1P20908 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.1□□□□□ -1.91
COL5A1P20908 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL5A1P20908 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL5A1P20908 RPS20P25-201ENST00000412447 352 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.09□□□□□ -1.91
COL5A1P20908 AL365396.1-201ENST00000430854 671 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.09□□□□□ -1.91
COL5A1P20908 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 RPL31P50-201ENST00000471002 296 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 AC021146.1-201ENST00000511202 716 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 Y_RNA.673-201ENST00000516306 88 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 MTND2P7-201ENST00000521337 640 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
COL5A1P20908 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 EIF5A2P1-201ENST00000564027 460 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.09□□□□□ -1.91
COL5A1P20908 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.09□□□□□ -1.91
COL5A1P20908 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 MIR622-201ENST00000638396 96 ntBASIC3.09□□□□□ -1.91
COL5A1P20908 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
COL5A1P20908 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
COL5A1P20908 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
COL5A1P20908 RNU4-82P-201ENST00000362443 140 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.09□□□□□ -1.92
COL5A1P20908 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 MIR1183-201ENST00000408856 89 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AC007899.1-201ENST00000412776 775 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AL513174.1-201ENST00000423182 629 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 ZYG11AP1-201ENST00000430329 837 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.09□□□□□ -1.92
COL5A1P20908 SETP5-201ENST00000437270 562 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 Z99127.3-201ENST00000448158 395 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
COL5A1P20908 HMGB1P5-202ENST00000451497 985 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.09□□□□□ -1.92
COL5A1P20908 AC021205.2-201ENST00000480069 347 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.09□□□□□ -1.92
COL5A1P20908 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL5A1P20908 AC022616.2-201ENST00000523185 300 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.09□□□□□ -1.92
COL5A1P20908 AC006504.1-201ENST00000562493 3666 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AC008507.1-201ENST00000587506 734 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.09□□□□□ -1.92
COL5A1P20908 AP003072.5-201ENST00000623872 773 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL5A1P20908 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
COL5A1P20908 RPS4XP5-202ENST00000449995 1334 ntBASIC3.09□□□□□ -1.92
COL5A1P20908 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.08□□□□□ -1.92
COL5A1P20908 AL365361.1-201ENST00000566942 3481 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.08□□□□□ -1.92
COL5A1P20908 AL136360.1-201ENST00000503377 1900 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL5A1P20908 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AL138878.1-201ENST00000405131 347 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AL139281.1-201ENST00000422120 335 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 TPTE2P1-204ENST00000435256 593 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.08□□□□□ -1.92
COL5A1P20908 RPL12P26-201ENST00000452430 487 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.08□□□□□ -1.92
COL5A1P20908 AC010374.2-201ENST00000512933 535 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AF186190.1-201ENST00000517470 480 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AC107934.2-201ENST00000518653 310 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AC103783.1-201ENST00000520506 373 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.08□□□□□ -1.92
COL5A1P20908 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
COL5A1P20908 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.08□□□□□ -1.92
COL5A1P20908 AC015849.2-201ENST00000605738 409 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AC100793.4-201ENST00000613683 429 ntBASIC3.08□□□□□ -1.92
COL5A1P20908 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.08□□□□□ -1.92
COL5A1P20908 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL5A1P20908 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
COL5A1P20908 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL5A1P20908 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL5A1P20908 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms