Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 AL845552.1-201ENST00000556820 323 ntBASIC5.18□□□□□ -1.58
ATF4P18848 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 AL035413.2-201ENST00000604801 525 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AL450472.3-201ENST00000615578 367 ntBASIC5.18□□□□□ -1.58
ATF4P18848 uc_338.11-201ENST00000619132 160 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AC093648.1-201ENST00000623546 606 ntBASIC5.18□□□□□ -1.58
ATF4P18848 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 NEAT1-202ENST00000501122 22743 ntBASIC5.18□□□□□ -1.58
ATF4P18848 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 AL137141.1-201ENST00000624622 4836 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
ATF4P18848 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 AL365440.1-201ENST00000436135 2167 ntBASIC5.17□□□□□ -1.58
ATF4P18848 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATF4P18848 RNU6-960P-201ENST00000364056 120 ntBASIC5.17□□□□□ -1.58
ATF4P18848 U3.10-201ENST00000364459 214 ntBASIC5.17□□□□□ -1.58
ATF4P18848 U3.15-201ENST00000365398 212 ntBASIC5.17□□□□□ -1.58
ATF4P18848 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 AL136116.1-201ENST00000403591 381 ntBASIC5.17□□□□□ -1.58
ATF4P18848 RNU2-41P-201ENST00000410991 178 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AL022324.2-201ENST00000434827 780 ntBASIC5.17□□□□□ -1.58
ATF4P18848 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 AC013403.1-201ENST00000436954 263 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC023274.2-201ENST00000445264 521 ntBASIC5.17□□□□□ -1.58
ATF4P18848 MTND1P18-201ENST00000448191 573 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 BX842559.2-201ENST00000451418 605 ntBASIC5.17□□□□□ -1.58
ATF4P18848 MTND1P11-201ENST00000456661 876 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.17□□□□□ -1.58
ATF4P18848 MRPS17P3-201ENST00000465453 385 ntBASIC5.17□□□□□ -1.58
ATF4P18848 RN7SL432P-201ENST00000484057 298 ntBASIC5.17□□□□□ -1.58
ATF4P18848 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 RPL23AP80-201ENST00000495605 424 ntBASIC5.17□□□□□ -1.58
ATF4P18848 NIPA2P2-201ENST00000496376 1083 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC091951.2-201ENST00000500762 203 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC139783.2-201ENST00000504847 1145 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 CARSP2-201ENST00000520688 277 ntBASIC5.17□□□□□ -1.58
ATF4P18848 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.17□□□□□ -1.58
ATF4P18848 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.17□□□□□ -1.58
ATF4P18848 OR5AL2P-201ENST00000532185 920 ntBASIC5.17□□□□□ -1.58
ATF4P18848 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 AC125611.2-201ENST00000551907 647 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC068831.4-201ENST00000556118 109 ntBASIC5.17□□□□□ -1.58
ATF4P18848 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.17□□□□□ -1.58
ATF4P18848 RN7SL270P-201ENST00000579643 281 ntBASIC5.17□□□□□ -1.58
ATF4P18848 CTSLP2-201ENST00000580501 394 ntBASIC5.17□□□□□ -1.58
ATF4P18848 FGF7P1-201ENST00000582820 288 ntBASIC5.17□□□□□ -1.58
ATF4P18848 MIR5682-201ENST00000584864 76 ntBASIC5.17□□□□□ -1.58
ATF4P18848 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC011712.1-201ENST00000588959 234 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.17□□□□□ -1.58
ATF4P18848 AC008945.2-201ENST00000606056 604 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC009994.1-201ENST00000606889 253 ntBASIC5.17□□□□□ -1.58
ATF4P18848 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.17□□□□□ -1.58
ATF4P18848 AL359314.1-201ENST00000616913 261 ntBASIC5.17□□□□□ -1.58
ATF4P18848 AC233309.1-201ENST00000619522 751 ntBASIC5.17□□□□□ -1.58
ATF4P18848 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 AC055839.1-201ENST00000634467 498 ntBASIC5.17□□□□□ -1.58
ATF4P18848 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 THAP12P5-201ENST00000405864 2275 ntBASIC5.17□□□□□ -1.58
ATF4P18848 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATF4P18848 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.17□□□□□ -1.58
ATF4P18848 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
ATF4P18848 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATF4P18848 IRF5P1-201ENST00000504852 2164 ntBASIC5.16□□□□□ -1.58
ATF4P18848 AL645937.1-201ENST00000641739 1652 ntBASIC5.16□□□□□ -1.58
ATF4P18848 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
ATF4P18848 RPL7P26-201ENST00000333817 754 ntBASIC5.16□□□□□ -1.58
ATF4P18848 RN7SKP279-201ENST00000411383 298 ntBASIC5.16□□□□□ -1.58
ATF4P18848 RSU1P3-201ENST00000412878 835 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms