Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
ATF3P18847 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF3P18847 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF3P18847 Z99496.1-201ENST00000469424 1477 ntBASIC5.6□□□□□ -1.51
ATF3P18847 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
ATF3P18847 RNU6-582P-201ENST00000362989 107 ntBASIC5.6□□□□□ -1.51
ATF3P18847 RNU6-444P-201ENST00000383988 108 ntBASIC5.6□□□□□ -1.51
ATF3P18847 RNU1-44P-201ENST00000384453 163 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF3P18847 AL161631.1-201ENST00000417933 486 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AL035423.1-201ENST00000420331 213 ntBASIC5.6□□□□□ -1.51
ATF3P18847 GNG5P5-201ENST00000420444 220 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF3P18847 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF3P18847 TPTE2P3-201ENST00000441562 1189 ntBASIC5.6□□□□□ -1.51
ATF3P18847 NF1P3-201ENST00000457709 450 ntBASIC5.6□□□□□ -1.51
ATF3P18847 PNPLA4P1-201ENST00000458328 305 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AC011979.1-201ENST00000472300 483 ntBASIC5.6□□□□□ -1.51
ATF3P18847 RPL29P14-201ENST00000495837 428 ntBASIC5.6□□□□□ -1.51
ATF3P18847 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 BNIP3P41-201ENST00000503774 571 ntBASIC5.6□□□□□ -1.51
ATF3P18847 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF3P18847 RNU6-885P-201ENST00000516607 104 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 AC074029.1-201ENST00000552531 1044 ntBASIC5.6□□□□□ -1.51
ATF3P18847 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF3P18847 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 AC106782.4-201ENST00000568264 210 ntBASIC5.6□□□□□ -1.51
ATF3P18847 AL354760.1-201ENST00000608357 643 ntBASIC5.6□□□□□ -1.51
ATF3P18847 MIR6864-201ENST00000617935 70 ntBASIC5.6□□□□□ -1.51
ATF3P18847 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF3P18847 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF3P18847 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF3P18847 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
ATF3P18847 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 SEPT7P7-201ENST00000420492 1301 ntBASIC5.59□□□□□ -1.51
ATF3P18847 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 SNORD116-23-201ENST00000384645 92 ntBASIC5.59□□□□□ -1.51
ATF3P18847 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF3P18847 MTCO2P21-201ENST00000419780 677 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF3P18847 RPL30P3-201ENST00000424262 333 ntBASIC5.59□□□□□ -1.51
ATF3P18847 OR4F13P-201ENST00000428478 931 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL513175.1-201ENST00000431492 780 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL159987.2-201ENST00000432754 307 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC010881.1-201ENST00000433830 235 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 AC105402.2-201ENST00000438503 358 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF3P18847 PTENP1-201ENST00000447117 1215 ntBASIC5.59□□□□□ -1.51
ATF3P18847 COX6CP18-201ENST00000448769 222 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.59□□□□□ -1.51
ATF3P18847 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 AC106707.2-201ENST00000484182 374 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC104619.4-201ENST00000510773 249 ntBASIC5.59□□□□□ -1.51
ATF3P18847 RNA5SP179-201ENST00000517284 121 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 DEFB109D-201ENST00000529497 240 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC023050.2-201ENST00000544968 387 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.59□□□□□ -1.51
ATF3P18847 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF3P18847 MIR3922-201ENST00000585192 84 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL031985.2-201ENST00000600955 480 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF3P18847 AC087683.2-201ENST00000611384 326 ntBASIC5.59□□□□□ -1.51
ATF3P18847 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 AL031658.2-201ENST00000616850 651 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.59□□□□□ -1.51
ATF3P18847 AC011330.2-201ENST00000621680 635 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AP002782.1-201ENST00000623107 614 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AL512506.2-201ENST00000624472 458 ntBASIC5.59□□□□□ -1.51
ATF3P18847 AP000676.4-201ENST00000624659 623 ntBASIC5.59□□□□□ -1.51
ATF3P18847 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF3P18847 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF3P18847 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.59□□□□□ -1.51
ATF3P18847 SAGE2P-201ENST00000420011 2126 ntBASIC5.59□□□□□ -1.52
ATF3P18847 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.59□□□□□ -1.52
ATF3P18847 AC021242.1-201ENST00000507315 2035 ntBASIC5.58□□□□□ -1.52
ATF3P18847 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATF3P18847 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATF3P18847 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.58□□□□□ -1.52
ATF3P18847 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATF3P18847 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.58□□□□□ -1.52
ATF3P18847 RNA5SP97-201ENST00000365006 84 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms