Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.3□□□□□ -1.56
PTPN1P18031 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN1P18031 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN1P18031 MIR544B-201ENST00000582372 78 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 AC006504.3-201ENST00000586818 523 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 AL592295.2-201ENST00000612578 206 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 AC092794.2-201ENST00000620933 563 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 CR392039.4-201ENST00000624968 501 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN1P18031 FAM157B-203ENST00000639350 358 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN1P18031 USP9YP4-201ENST00000424401 1745 ntBASIC5.3□□□□□ -1.56
PTPN1P18031 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN1P18031 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN1P18031 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN1P18031 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN1P18031 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN1P18031 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN1P18031 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PTPN1P18031 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PTPN1P18031 Y_RNA.296-201ENST00000364930 108 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 Y_RNA.450-201ENST00000384198 113 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 RNU6-114P-201ENST00000384704 105 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 PRRC2CP1-201ENST00000404428 159 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 MIR320C1-201ENST00000408566 88 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 AL513174.1-201ENST00000423182 629 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 NPM1P34-201ENST00000428821 893 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 RPL7P11-201ENST00000437586 658 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 SKP1P1-201ENST00000438081 489 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 LSM1P1-201ENST00000438629 273 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 PGBD4P3-201ENST00000440731 581 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC112498.1-201ENST00000444401 332 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 AC022431.1-201ENST00000450941 438 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 ACTR3P3-201ENST00000480448 893 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC108078.1-201ENST00000508073 725 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AP000859.1-201ENST00000525536 307 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 MIR3934-201ENST00000579806 107 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC009977.1-201ENST00000586015 570 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN1P18031 AP001521.2-201ENST00000608772 546 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC092954.2-201ENST00000609103 430 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC136475.10-201ENST00000620253 385 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN1P18031 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 AC063976.2-201ENST00000425667 3556 ntBASIC5.29□□□□□ -1.56
PTPN1P18031 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN1P18031 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN1P18031 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN1P18031 MUC2-202ENST00000613187 4845 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN1P18031 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN1P18031 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTPN1P18031 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PTPN1P18031 RNU6-777P-201ENST00000364265 104 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 AL133270.1-201ENST00000402635 279 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN1P18031 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN1P18031 PRELID3BP11-201ENST00000414230 479 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 COX6B1P1-201ENST00000415962 213 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 BX890604.2-201ENST00000427883 474 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN1P18031 RPL37P1-201ENST00000432310 284 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN1P18031 AL662791.1-201ENST00000441992 928 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 AC112653.1-201ENST00000443851 386 ntBASIC5.28□□□□□ -1.56
PTPN1P18031 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms