Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL592494.2-201ENST00000425455 1548 ntBASIC3.69□□□□□ -1.82
CTDNEP1O95476 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTDNEP1O95476 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTDNEP1O95476 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTDNEP1O95476 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 U3.11-201ENST00000364476 212 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 TXNP1-201ENST00000441872 371 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 ELOCP23-201ENST00000452014 332 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 BTF3P5-201ENST00000457252 467 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 RPL7P48-201ENST00000461513 746 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 FTH1P2-201ENST00000466086 412 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 AC021205.1-201ENST00000468797 348 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 MIR4458-201ENST00000578872 75 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 MIR4512-201ENST00000583257 77 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 BMS1P7-201ENST00000602440 1052 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.68□□□□□ -1.82
CTDNEP1O95476 AC015849.2-201ENST00000605738 409 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 AL713922.2-201ENST00000619384 716 ntBASIC3.68□□□□□ -1.82
CTDNEP1O95476 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 RNU6-564P-201ENST00000410983 104 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 HMGB3P23-201ENST00000414981 585 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 RPS15AP6-201ENST00000420703 385 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 RPF2P1-201ENST00000424137 906 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 EXTL2P1-201ENST00000446218 416 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 ST13P14-201ENST00000474095 734 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC114967.1-201ENST00000504890 259 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 SNORA26.10-201ENST00000516427 141 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC068657.1-201ENST00000520807 306 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC011611.1-201ENST00000552179 197 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 AL049874.4-201ENST00000557593 255 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC009268.1-201ENST00000561352 1203 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC008739.3-201ENST00000603262 127 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 MIR7112-201ENST00000616126 65 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 RMST_5.1-201ENST00000618704 126 ntBASIC3.67□□□□□ -1.82
CTDNEP1O95476 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTDNEP1O95476 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
CTDNEP1O95476 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTDNEP1O95476 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTDNEP1O95476 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTDNEP1O95476 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 RNU6-386P-201ENST00000362650 107 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC048351.1-201ENST00000420064 602 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 B3GNT2P1-201ENST00000434960 952 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC044797.1-201ENST00000445744 679 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 CCRL1P1-201ENST00000449542 1053 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 C1DP3-201ENST00000455013 423 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 RNU6-362P-201ENST00000516736 90 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 DUXAP2-201ENST00000519198 589 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC009101.1-201ENST00000568135 242 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC005412.1-201ENST00000580812 1049 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC245128.3-201ENST00000594721 748 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC007423.1-201ENST00000605009 627 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 BX322635.1-201ENST00000605804 496 ntBASIC3.66□□□□□ -1.82
CTDNEP1O95476 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms