Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPS21P8-201ENST00000413365 247 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC063976.3-201ENST00000426849 329 ntBASIC1.38□□□□□ -2.19
USH2AO75445 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC1.38□□□□□ -2.19
USH2AO75445 NTAN1P1-201ENST00000603150 646 ntBASIC1.38□□□□□ -2.19
USH2AO75445 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 RNU6-582P-201ENST00000362989 107 ntBASIC1.37□□□□□ -2.19
USH2AO75445 NAP1L1P2-201ENST00000414182 1089 ntBASIC1.37□□□□□ -2.19
USH2AO75445 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.37□□□□□ -2.19
USH2AO75445 AC087312.1-201ENST00000471411 480 ntBASIC1.37□□□□□ -2.19
USH2AO75445 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC1.37□□□□□ -2.19
USH2AO75445 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.37□□□□□ -2.19
USH2AO75445 AL133457.1-201ENST00000564251 987 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC015849.2-201ENST00000605738 409 ntBASIC1.37□□□□□ -2.19
USH2AO75445 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 AL359715.4-201ENST00000606629 1436 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC007336.1-201ENST00000576365 3828 ntBASIC1.37□□□□□ -2.19
USH2AO75445 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.37□□□□□ -2.19
USH2AO75445 STK31-205ENST00000433467 3085 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 AC004972.1-201ENST00000623934 2209 ntBASIC1.37□□□□□ -2.19
USH2AO75445 RNA5SP325-201ENST00000363756 130 ntBASIC1.37□□□□□ -2.19
USH2AO75445 SNORD67-201ENST00000390833 111 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AL592148.1-201ENST00000413568 445 ntBASIC1.37□□□□□ -2.19
USH2AO75445 HMGB1P15-201ENST00000453854 435 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC106872.2-201ENST00000494303 480 ntBASIC1.37□□□□□ -2.19
USH2AO75445 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 AC017002.4-201ENST00000604721 1525 ntBASIC1.37□□□□□ -2.19
USH2AO75445 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
USH2AO75445 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 RNA5SP184-201ENST00000411071 108 ntBASIC1.37□□□□□ -2.19
USH2AO75445 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.37□□□□□ -2.19
USH2AO75445 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 MORF4L2P1-201ENST00000503761 858 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC112198.1-201ENST00000505369 1220 ntBASIC1.37□□□□□ -2.19
USH2AO75445 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC1.37□□□□□ -2.19
USH2AO75445 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.37□□□□□ -2.19
USH2AO75445 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 AP004247.3-201ENST00000608682 624 ntBASIC1.37□□□□□ -2.19
USH2AO75445 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 AL513302.2-201ENST00000562313 1842 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 IPO8P1-201ENST00000455509 3109 ntBASIC1.37□□□□□ -2.19
USH2AO75445 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 RNA5SP213-201ENST00000391031 106 ntBASIC1.37□□□□□ -2.19
USH2AO75445 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.37□□□□□ -2.19
USH2AO75445 AC010655.1-201ENST00000449336 292 ntBASIC1.37□□□□□ -2.19
USH2AO75445 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 DEFB109A-201ENST00000482450 265 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC092436.3-201ENST00000511788 257 ntBASIC1.37□□□□□ -2.19
USH2AO75445 YWHAZP1-201ENST00000556286 722 ntBASIC1.37□□□□□ -2.19
USH2AO75445 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.37□□□□□ -2.19
USH2AO75445 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 MFSD8-233ENST00000641482 4860 ntBASIC1.37□□□□□ -2.19
USH2AO75445 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
USH2AO75445 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
USH2AO75445 EXOC5P1-201ENST00000510543 1969 ntBASIC1.37□□□□□ -2.19
USH2AO75445 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 AL139276.1-201ENST00000311910 1001 ntBASIC1.36□□□□□ -2.19
USH2AO75445 RPL7P8-201ENST00000411964 730 ntBASIC1.36□□□□□ -2.19
USH2AO75445 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.36□□□□□ -2.19
USH2AO75445 MIR1273D-201ENST00000577266 86 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.36□□□□□ -2.19
USH2AO75445 SLC25A36P1-201ENST00000590111 465 ntBASIC1.36□□□□□ -2.19
USH2AO75445 uc_338.25-201ENST00000613756 156 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AL591424.2-201ENST00000617023 128 ntBASIC1.36□□□□□ -2.19
USH2AO75445 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 AP000641.1-201ENST00000531988 1639 ntBASIC1.36□□□□□ -2.19
USH2AO75445 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.36□□□□□ -2.19
USH2AO75445 VN1R8P-201ENST00000407739 893 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms