Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN2BO60939 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN2BO60939 BX276092.4-201ENST00000452056 248 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 RPS4XP2-201ENST00000458402 793 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN2BO60939 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN2BO60939 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SCN2BO60939 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN2BO60939 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN2BO60939 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN2BO60939 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN2BO60939 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN2BO60939 MIR3160-1-201ENST00000577972 85 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN2BO60939 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN2BO60939 AC068831.8-201ENST00000620171 435 ntBASIC3.35□□□□□ -1.87
SCN2BO60939 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN2BO60939 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN2BO60939 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN2BO60939 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN2BO60939 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN2BO60939 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SCN2BO60939 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SCN2BO60939 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN2BO60939 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 RNU2-21P-201ENST00000410368 188 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 RNU6-954P-201ENST00000411355 107 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 NIPA2P1-201ENST00000426223 976 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 AL357552.1-201ENST00000445254 415 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 RPL12P26-201ENST00000452430 487 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.34□□□□□ -1.87
SCN2BO60939 NF1P3-201ENST00000457709 450 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN2BO60939 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.34□□□□□ -1.87
SCN2BO60939 HMGN1P11-201ENST00000508668 303 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 FABP5P6-201ENST00000510588 409 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 HMGB1P47-201ENST00000511281 589 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN2BO60939 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AC084824.1-201ENST00000550917 1005 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 MIR3690-201ENST00000580266 75 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.34□□□□□ -1.87
SCN2BO60939 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SCN2BO60939 AC119674.1-207ENST00000641355 633 ntBASIC3.34□□□□□ -1.87
SCN2BO60939 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN2BO60939 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SCN2BO60939 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.34□□□□□ -1.88
SCN2BO60939 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SCN2BO60939 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.88
SCN2BO60939 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCN2BO60939 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCN2BO60939 RNA5SP515-201ENST00000364570 118 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SCN2BO60939 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN2BO60939 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 RPS3AP46-201ENST00000448352 682 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN2BO60939 RPL5P24-201ENST00000463742 885 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 AP000893.1-201ENST00000474462 794 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 AP000563.1-201ENST00000490865 758 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN2BO60939 COX6B1P6-201ENST00000522347 255 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 MTND2P26-201ENST00000528255 1029 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 PDCL2P2-201ENST00000533651 189 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
SCN2BO60939 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN2BO60939 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
SCN2BO60939 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN2BO60939 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms