Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
SNX3O60493 RN7SKP277-201ENST00000516895 283 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 SUMO2P20-201ENST00000520803 283 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 AC093519.1-201ENST00000566109 298 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC074051.3-201ENST00000570238 358 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.88□□□□□ -1.79
SNX3O60493 AL355816.2-201ENST00000610049 647 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC024257.5-201ENST00000612739 531 ntBASIC3.88□□□□□ -1.79
SNX3O60493 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 AC006386.1-201ENST00000619436 415 ntBASIC3.88□□□□□ -1.79
SNX3O60493 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 AL512506.2-201ENST00000624472 458 ntBASIC3.88□□□□□ -1.79
SNX3O60493 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX3O60493 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX3O60493 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX3O60493 AL139811.1-201ENST00000424779 2299 ntBASIC3.87□□□□□ -1.79
SNX3O60493 Z73965.1-201ENST00000623412 2297 ntBASIC3.87□□□□□ -1.79
SNX3O60493 Z99496.1-201ENST00000469424 1477 ntBASIC3.87□□□□□ -1.79
SNX3O60493 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX3O60493 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX3O60493 RNU6-1066P-201ENST00000363573 105 ntBASIC3.87□□□□□ -1.79
SNX3O60493 RNU1-85P-201ENST00000364127 164 ntBASIC3.87□□□□□ -1.79
SNX3O60493 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX3O60493 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 RNU6-921P-201ENST00000384361 107 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AL121978.1-201ENST00000402778 359 ntBASIC3.87□□□□□ -1.79
SNX3O60493 BTBD10P2-201ENST00000404779 676 ntBASIC3.87□□□□□ -1.79
SNX3O60493 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 RPL7AP73-201ENST00000413490 353 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AL356387.2-201ENST00000422272 243 ntBASIC3.87□□□□□ -1.79
SNX3O60493 GTF2IP23-201ENST00000423746 351 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC005345.1-201ENST00000431868 217 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AL035246.1-201ENST00000433554 1255 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AL359265.2-201ENST00000434367 631 ntBASIC3.87□□□□□ -1.79
SNX3O60493 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX3O60493 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 AC020699.1-201ENST00000505161 445 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
SNX3O60493 PCBP2P3-201ENST00000509726 843 ntBASIC3.87□□□□□ -1.79
SNX3O60493 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC093755.1-201ENST00000512950 1023 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC090819.1-201ENST00000523800 1111 ntBASIC3.87□□□□□ -1.79
SNX3O60493 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AP000790.1-201ENST00000528891 737 ntBASIC3.87□□□□□ -1.79
SNX3O60493 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.87□□□□□ -1.79
SNX3O60493 MTND1P24-201ENST00000552175 861 ntBASIC3.87□□□□□ -1.79
SNX3O60493 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX3O60493 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
SNX3O60493 SNORD39.3-201ENST00000584451 71 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX3O60493 AL365503.1-201ENST00000605247 905 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC069545.1-201ENST00000605671 358 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AP003117.2-201ENST00000606010 545 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC016877.3-201ENST00000606778 504 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC004948.1-201ENST00000609858 672 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AC004825.2-201ENST00000616634 455 ntBASIC3.87□□□□□ -1.79
SNX3O60493 MIR7151-201ENST00000617477 60 ntBASIC3.87□□□□□ -1.79
SNX3O60493 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX3O60493 BMS1P21-201ENST00000634565 365 ntBASIC3.87□□□□□ -1.79
SNX3O60493 DBF4P1-201ENST00000412976 1892 ntBASIC3.87□□□□□ -1.79
SNX3O60493 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX3O60493 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX3O60493 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX3O60493 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX3O60493 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SNX3O60493 AC025125.1-201ENST00000624743 1922 ntBASIC3.86□□□□□ -1.79
SNX3O60493 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX3O60493 RNU6-492P-201ENST00000363035 104 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RNU6-283P-201ENST00000364788 107 ntBASIC3.86□□□□□ -1.79
SNX3O60493 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 ENSAP1-201ENST00000392855 326 ntBASIC3.86□□□□□ -1.79
SNX3O60493 MIR1178-201ENST00000408396 91 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RN7SKP285-201ENST00000410137 318 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RPS3AP9-201ENST00000417027 792 ntBASIC3.86□□□□□ -1.79
SNX3O60493 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 BX510359.3-201ENST00000422168 306 ntBASIC3.86□□□□□ -1.79
SNX3O60493 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RPL7P44-201ENST00000424827 742 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RPL31P54-201ENST00000429803 370 ntBASIC3.86□□□□□ -1.79
SNX3O60493 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms