Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 OR4A12P-201ENST00000530847 918 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.04□□□□□ -1.76
ZIC3O60481 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.04□□□□□ -1.76
ZIC3O60481 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.04□□□□□ -1.76
ZIC3O60481 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.04□□□□□ -1.76
ZIC3O60481 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 MIR4277-201ENST00000578298 84 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 AC090948.1-201ENST00000607464 549 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC011939.3-201ENST00000613686 466 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AL121873.1-201ENST00000616013 524 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 Z69908.1-201ENST00000622603 247 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC091905.2-201ENST00000623143 306 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC015908.5-201ENST00000623289 343 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC006065.6-201ENST00000625201 545 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
ZIC3O60481 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 ZNF37BP-203ENST00000452306 1352 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 RNU6-984P-201ENST00000363236 109 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 MIR649-201ENST00000384843 97 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MIR3065-201ENST00000390137 79 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 RNU2-21P-201ENST00000410368 188 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC073264.1-201ENST00000411508 416 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 CEACAMP8-201ENST00000413902 580 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 RPS3AP9-201ENST00000417027 792 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 AL592293.2-201ENST00000422292 996 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 NIPA2P1-201ENST00000426223 976 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 AC016712.1-201ENST00000431088 378 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 MTCYBP39-201ENST00000437562 491 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 THAP5P1-201ENST00000439089 262 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MTND6P18-201ENST00000439477 513 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 PTMAP3-201ENST00000447474 330 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 RPL23AP35-201ENST00000451906 501 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 USP9YP10-201ENST00000454868 628 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 DHFRP3-201ENST00000455595 559 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 RPS27AP17-201ENST00000463344 455 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MTND4LP3-201ENST00000468320 276 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC010683.1-201ENST00000473673 378 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.03□□□□□ -1.76
ZIC3O60481 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.03□□□□□ -1.76
ZIC3O60481 RPS4XP18-201ENST00000495480 763 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC080014.1-201ENST00000496877 1201 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC091435.1-201ENST00000505442 584 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MTCYBP37-201ENST00000510642 1133 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.03□□□□□ -1.76
ZIC3O60481 AC009643.1-201ENST00000532030 391 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.03□□□□□ -1.76
ZIC3O60481 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 MIR4284-201ENST00000578924 81 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 MIR4716-201ENST00000579628 84 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 AL031985.2-201ENST00000600955 480 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC103792.1-201ENST00000603591 919 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AL008729.2-201ENST00000606393 473 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AP002360.3-201ENST00000607673 710 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
ZIC3O60481 AC099063.3-201ENST00000642066 185 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
ZIC3O60481 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZIC3O60481 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.03□□□□□ -1.76
ZIC3O60481 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZIC3O60481 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZIC3O60481 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZIC3O60481 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZIC3O60481 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZIC3O60481 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms