Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 AC092104.1-201ENST00000497346 1441 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 AC073544.1-201ENST00000600110 1595 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 EIF2AP4-201ENST00000424793 1781 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 RNU6-1243P-201ENST00000364028 107 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 RNU1-85P-201ENST00000364127 164 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 RPS3AP23-201ENST00000401762 784 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM38O00635 MTND1P23-201ENST00000416931 372 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 BX510359.2-201ENST00000417920 305 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC062016.2-201ENST00000420950 676 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 RPL31P54-201ENST00000429803 370 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 VDAC1P6-201ENST00000430062 855 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM38O00635 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM38O00635 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM38O00635 AL691482.1-201ENST00000453255 87 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 MTND3P7-201ENST00000474435 343 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM38O00635 AC013828.1-201ENST00000481845 158 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC104057.1-201ENST00000515547 497 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 SLC2A13P1-201ENST00000531560 322 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM38O00635 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 AL161713.1-201ENST00000555538 145 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 AGGF1P4-201ENST00000568249 801 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC135628.1-201ENST00000568867 534 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 MIR4284-201ENST00000578924 81 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM38O00635 AC090312.1-201ENST00000580637 348 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 RN7SL690P-201ENST00000582087 240 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AC107982.3-201ENST00000584957 985 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AP001981.2-201ENST00000603241 418 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 AC067852.7-201ENST00000623270 535 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AL356266.1-201ENST00000623311 483 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AL356596.1-201ENST00000624230 379 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AL160394.1-201ENST00000624765 724 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AP000843.1-201ENST00000624880 701 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM38O00635 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM38O00635 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM38O00635 AC027514.1-201ENST00000588561 1603 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
TRIM38O00635 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM38O00635 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM38O00635 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM38O00635 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 MAPK10-349ENST00000641767 3661 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM38O00635 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 Y_RNA.408-201ENST00000383987 102 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL356967.1-201ENST00000406305 431 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 RN7SKP106-201ENST00000410832 272 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC068533.2-201ENST00000411872 306 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 RSU1P3-201ENST00000412878 835 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 RPL31P2-201ENST00000413849 377 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 MTCO3P41-201ENST00000414801 328 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 COX6CP15-201ENST00000426313 211 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 YWHAZP7-201ENST00000436906 631 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms