Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 TMEM248P1-201ENST00000510579 951 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 PSMA2P1-201ENST00000526365 646 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC021006.3-201ENST00000530771 192 ntBASIC5.95□□□□□ -1.46
SOX1O00570 ELOCP31-201ENST00000540463 467 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 AC093012.1-202ENST00000549403 582 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX1O00570 MIR4742-201ENST00000581069 85 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC008687.2-201ENST00000597865 520 ntBASIC5.95□□□□□ -1.46
SOX1O00570 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX1O00570 AC090607.5-201ENST00000615692 224 ntBASIC5.95□□□□□ -1.46
SOX1O00570 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 AL354950.2-201ENST00000617939 290 ntBASIC5.95□□□□□ -1.46
SOX1O00570 U6.101-201ENST00000637707 76 ntBASIC5.95□□□□□ -1.46
SOX1O00570 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX1O00570 AC130304.1-201ENST00000622942 2385 ntBASIC5.95□□□□□ -1.46
SOX1O00570 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX1O00570 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
SOX1O00570 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX1O00570 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AL121768.1-201ENST00000613917 2544 ntBASIC5.94□□□□□ -1.46
SOX1O00570 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AC104118.1-201ENST00000607625 1589 ntBASIC5.94□□□□□ -1.46
SOX1O00570 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX1O00570 RNU6-984P-201ENST00000363236 109 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RNU4-1-201ENST00000363925 141 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RN7SKP6-201ENST00000364795 319 ntBASIC5.94□□□□□ -1.46
SOX1O00570 SNORD42.2-201ENST00000365570 69 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RNU6-474P-201ENST00000384243 107 ntBASIC5.94□□□□□ -1.46
SOX1O00570 Y_RNA.579-201ENST00000390939 94 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RNA5SP332-201ENST00000391063 115 ntBASIC5.94□□□□□ -1.46
SOX1O00570 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AC078974.1-201ENST00000411597 223 ntBASIC5.94□□□□□ -1.46
SOX1O00570 GPR143P-201ENST00000434155 205 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RPL36AP15-201ENST00000444514 266 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC002381.1-201ENST00000447049 280 ntBASIC5.94□□□□□ -1.46
SOX1O00570 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC112187.1-201ENST00000455837 479 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RNU6-329P-201ENST00000459618 107 ntBASIC5.94□□□□□ -1.46
SOX1O00570 APOOP2-201ENST00000461561 539 ntBASIC5.94□□□□□ -1.46
SOX1O00570 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 RPL38P3-201ENST00000484463 213 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AP001025.2-201ENST00000490908 477 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RPS4XP18-201ENST00000495480 763 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC023818.1-201ENST00000498379 384 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AC108471.1-201ENST00000513977 287 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC093677.1-201ENST00000514414 678 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RN7SKP122-201ENST00000515923 296 ntBASIC5.94□□□□□ -1.46
SOX1O00570 RNU6-1314P-201ENST00000517139 104 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AL355836.1-201ENST00000555951 870 ntBASIC5.94□□□□□ -1.46
SOX1O00570 NPM1P42-201ENST00000560329 862 ntBASIC5.94□□□□□ -1.46
SOX1O00570 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX1O00570 MIR3160-1-201ENST00000577972 85 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC008737.2-201ENST00000599446 118 ntBASIC5.94□□□□□ -1.46
SOX1O00570 BBIP1P1-201ENST00000602999 279 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC025574.2-201ENST00000615621 514 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX1O00570 AC022106.2-201ENST00000620114 757 ntBASIC5.94□□□□□ -1.46
SOX1O00570 AC099494.2-201ENST00000623371 978 ntBASIC5.94□□□□□ -1.46
SOX1O00570 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX1O00570 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX1O00570 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.94□□□□□ -1.46
SOX1O00570 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.94□□□□□ -1.46
SOX1O00570 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 AL122126.1-201ENST00000546905 1318 ntBASIC5.94□□□□□ -1.46
SOX1O00570 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX1O00570 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX1O00570 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms